Austrofundulus limnaeus (annual killifish): 106529426
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Entry
106529426 CDS
T06063
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106529426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106529426
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106529426
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106529426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106529426
NCBI-ProteinID:
XP_013880300
UniProt:
A0A2I4CJZ0
LinkDB
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Position
Unknown
AA seq
910 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVDAIKKIKDDVEYYIDSSQDPDFEENEFLYDDLDLDDIPQSLVA
TSPPGHSHLEDEIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSASGLTSSSLVSLATMAGGGGGCGGSSHHNNISHTSAGSYSN
ATQQPPHPSVQQQAKHSAGSSAPLSNSSVSTNSHSAPSASSPPNVGTQGLLTSNSQPPAP
LGPASSSNSLGLSLGLSLGKSILSSSIPTSPMSGGLGLSGMPASLSTMASLLSSSTPTPY
AQAAALGTGSSGLPGSLGGVSASTTSNALGAIGSGSITVGGPTSSSGGVLSAAPGVGSIG
SGILGLSSGQSGVQGSSLLPQSPVGSLAPGSGIGVIGSSGGGSGSTGSGMVGGNSSLSVR
PPSQQKQNGSTSYSAVVADSTTEPALNSATQSQSSQSSSLTSTVSQLKDTGPSLLGSLSL
SSSSPSPASYSEAKTSSLLNGPLSYSPPESIKPQESLSSLKSISDQTALSSGIEGDVASL
HLTPDIFPSSTTAQSGPSSAPQPSLSEVSILPSLGVCPLGPVPLSKDQLYQQAMQDSAWM
HMPHPSDSERIRQYLMRNPCPTPPFHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKA
QYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFE
YRYLEDRDLQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggcgtagagcagtttgaagacatttggcaaaagctccacaatgcagccaacgcaaaccag
aaggagaaatatgaagccgatctcaaaaaagagattaaaaagctacagcgtctccgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaagaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcgtttcaagattgtggaaagagaaaccaagacg
aaagcatattcaaaagaagggctcggtcttgcccagaaagtggacccggcacagagggag
aaagaggaagtgggaacgtggttgacgaacacgatagacacgttgaacatgcaggtggac
cartttgaaagcgaagtggagtctctgtcagtccagacgaggaaaaagaaaggagacaaa
gagaagcaggaccggatcgaggagctgaaaaagttcatcgagaagcatcggtaccacatc
cgaatgctggagacgatactgaggatgctggacaatgactcggtgcaggtggacgccatc
aaaaagataaaggatgatgtggagtactatatagactcatcgcaggatccagactttgaa
gagaatgagttcctttatgacgacctggacctggacgacattcctcagtcgctggttgcc
acgtccccgccgggccactcgcacctggaggacgagatcttccagaactccagcagcacg
cccacctccaccacatcatcttctcccatccccccttcgcctgccacttgcactacggaa
aactcagaagatgacaagaagaggggacgttcaacagacagtgaagttagccagtcacct
gtaaaaaacgggaatccctcctcttcgttgtcttcctcttcctcgtcgtcttcttccgct
tcgggactgacctcatcctccctggtctctttggccaccatggccggtggcggcggtggc
tgcgggggcagcagtcatcacaacaacatctcccacacttcggccggcagctacagcaac
gccacgcagcagccgccccacccgtcggtgcagcagcaggccaaacactcggcgggctcc
tcggcccccctctccaactcgagcgtctccaccaacagccacagcgccccctcggcatcc
tcgccaccgaacgtcggcacgcaggggcttctcacttcgaactcccagcccccggcgcct
ttggggcccgcgtcatcctccaacagcctcggcctcagtctgggactctctctgggaaaa
agcatcctgtccagttccatccccaccagcccaatgtcggggggcctcggcctgtcaggg
atgccggcgtctctgagcacgatggccagcctcctgtccagctccaccccgactccttac
gcccaagcggccgccttaggcacgggcagctcaggcctgccgggctccctcggaggcgtc
agtgcctcgaccaccagcaacgcgttgggggccatcggcagcgggagcatcacagtcggc
gggccgacttcctcctcggggggcgtgctgagcgcrgccccgggagtgggcagcatcggc
tccgggattctgggtttgagctctggtcagtcgggggtgcaggggtcttccctgctgccg
cagagtcccgtgggaagcttagctccrggaagtgggatcggcgtgatcgggagcagtgga
ggcggctcgggatcgacgggaagcgggatggtgggaggaaactcatcgctgtcggtgcga
ccgccgagccaacagaagcagaacggtagcacgagttacagtgctgtggtcgcagacagc
acaacagaacccgccctcaacagtgccacccaatctcaaagcagccaatcctcatctttg
acctccacagtcagtcagcttaaggacactggtcccagtttactgggttctttgagtttg
tcatccagctccccgtcaccggcctcatacagcgaggcgaaaacgtccagcctgctgaac
ggaccgctgtcctactcgccccccgaaagcatcaagccccaggagtctctgagcagcctc
aagtccatctctgaccaaacagcactcagctcagggatcgagggagatgtggcctccctg
caccttactccagacatcttccccagcagcactacagcccagtcaggcccctcatcagca
cctcagccctcgctgtcagaggtcagcatcctcccctcgctgggggtctgtccgctgggg
ccggttcccctttccaaagaccagctctaccaacaggccatgcaggactcagcgtggatg
cacatgccccacccgtccgactccgagagaatcaggcagtatcttatgaggaacccctgc
cccaccccacctttccaccaccagatgccaccacctcactccgacactgtagagttttac
cagaggctctccacggagactctctttttcatcttttactacctggagggcactaaggcc
cagtatctggcagccaaagccctgaagaaacaatcgtggaggttccacacgaaatacatg
atgtggtttcagaggcacgaagagcccaagaccatcactgatgagtttgagcagggaaca
tacatttactttgactacgagaagtggggccagaggaagaaggagggcttcacgtttgag
tatcggtacctagaagaccgagacctccagtga
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