Austrofundulus limnaeus (annual killifish): 106529506
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Entry
106529506 CDS
T06063
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106529506 (hnf1a)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106529506 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
106529506
NCBI-ProteinID:
XP_013880412
UniProt:
A0A2I4CK97
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All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MEGEEKXTAANARPSRLTALQEQLIWALLESGLSRDVLVQAVGELERSKAGGGPDRGEKG
DGESSEEGEMDFPPPIFRDLEKLPPDEASKLRAEVDRLLQEDPWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQCEISQQFTNAKHGLAPAEE
QGEETKKGRRNRFKWGPASLQILFNAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTSFTSQSASSSNPALPQSPEHGVKYSQ
QISCDTVSSGRGGAVERVGRLVVSPVQLEPSHTLLETHNPKLVSSNGPLPPVSTLTSLHS
LSASPASSQSLIMASVPSVMSLGESSLLIGLASTQPQTVPVINNMGGGFTTLQPISFQQQ
LHASHQQPLSQQLQSHMAASPFMATMAQLPCHMYKSDSPQYHSSSLLSQAMVITDSSSLG
TLTSLAAVRQILTADPEEGTDSPLQDDSLHLQPHTPVPASSESLELYPSSQMTERHPSHI
LSPSPTDISSYMPTQMVSTAQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggaaaaggygacagcagcaaacgccaggccgagccgtttgaccgccctt
caggagcagctcatctgggccctgctggaatccggactgtcccgggacgtcctggtccaa
gccgtgggggaactggagcgaagcaaggccggcggcgggcccgacaggggagagaagggg
gatggagagagctcggaggagggagaaatggatttcccgccgcctatattccgagatttg
gagaagcttcctccggatgaggcgtccaagctcagggctgaagtcgacagattactgcaa
gaggacccctggcatgttgcgaaaatggtgaaaagctacatgcagcagcacaacttacct
cagagagaggtagtggagtccacgggactcaaccagtcccacctgtcccagcacctcaac
aagggcacgcccatgaagaaccaaaagagagccgctctgtacacctggtacgtcaagaag
cagtgcgagatcagccagcagtttaccaatgccaaacacggcctcgcacctgcagaagaa
caaggagaggaaacyaaaaaggggcgaaggaacagatttaagtggggtcctgcatccctg
cagatcctcttcaacgcctacgaacgacaaaagaaccccagcaaggaggaaagagagggg
ctggtggaggagtgtaacagggcggagtgtctgcagaggggggtgtctccctcccagctt
gctggtctgggctccaacctggtcaccgaagtccgagtgtacaactggttcgccaaccgc
cgcaaagaggaggccttccgtcacaagctggccctcgacacatctttcacctcccagtca
gcttcctcctctaaccccgccctcccgcagagccccgagcacggtgtgaaatacagccag
caaatctcgtgtgacacagttagctcaggtagaggcggcgccgtggagcgagtggggcgt
cttgtggtcagtcccgtccaactggaacccagccacacactcctcgagacccataaccca
aagctggtgtccagcaacggccccctgcccccagtaagcactctgacgtccctgcacagc
ctgtctgcctcccctgcatcttcacagagcctcatcatggcttcagtgccgagcgtcatg
agtctaggagagtcctcgcttctcattggattagcttccacgcagccacagaccgtcccc
gttataaacaacatgggaggaggtttcacaactctccagccgatctcattccagcagcag
ctccacgcctcccaccagcagcctttatcacagcagcttcagagccacatggctgccagt
cccttcatggcgaccatggctcagctgccatgtcacatgtacaagtcggactcgccccag
taccactcgtccagcctgctgtctcaggccatggtcatcactgacagcagcagcctgggg
accctgaccagccttgctgcagtcagacagattctcacggcagacccagaggaagggaca
gactcacctttacaagatgattcattacacctgcagccgcacacacctgtgccagcttcc
tctgagagcctggagctgtatccttcctctcagatgacagagcgccatccatctcacatc
ctctcaccatcaccgacagacatcagctcctacatgccgacacaaatggtctctacagcc
cagtaa
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