Austrofundulus limnaeus (annual killifish): 106529827
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Entry
106529827 CDS
T06063
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106529827 (hfm1)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106529827 (hfm1)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106529827 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
106529827
NCBI-ProteinID:
XP_013880793
UniProt:
A0A2I4CLC7
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
METSEPWRDVKAVYVAPIKALCSQCFESWRKKFGPLGLNCKELTGDTEIDDFFEIHDSHI
ILTTPEKWDSMTRKWKDNCLLQLVRLFLIDEVHVVKDATRGATLEVVVSRMKAVQTFRTS
QNPKAGLSMRFVAASATVPNVSDIADWLSNESGPATYLSMDESHRPVKLRKVVLGFPCSQ
NQTEFKFDLTLNYKMANIIQTYSDQKPSLVFCSTRKGAQQSAAVLAKDARFILSCEHKQR
LMKYAHGILDSKLRELVMFGIGFHHAGVDLSDRKLVEEAFTLGHLPVLFTTRTLAMGVNL
PAHLVVIKSTVQYVAGSCEEYSEADILQMIGRAGRPQFDSSATAVIMTKVQTRDKYMKXM
NGIEIIESSLHSHLVEHLNAEIVLQTISDVNMALDWIRSTFLYIRALKNPTHYGFSADLD
RFGIEAKLQELCLKKLNALSSIDLISMDEDINIKPTEAGRLMARFCVAFGTMKLISNVVG
NESLSDLIELVSKSREFSDIQLRVNEKRALNTLNRDKNRTTIRFPLEGKIKTSEMKVNCL
IQAHLGSISIQDFGLTQDTAKIFRIGMRISKCLSEFXSHQSKSNFTAVLNSLILAKCFRA
KLWENSPYVSKQLEKIGQSLSTAMVNAGLTTFTKIEETNPRELELIVNRHPPFGNQIRES
VTHLPKYSVTLEQLPMYSSTTAEILVKVTLKNQTELLSRRTAADYHCVSLIIGNSDNNVV
FLQKLNDLLLLKCGSWSKKIDVAKPSNGDEISVSLISSDYVGLDVHQQISVFYPGARRFG
SETXCSLTGPEERPPHSAGKPLSTTQRESLSSATQQDSGSKRQCNHFCKNKSCCAHECCK
VGVAVGWKRSANQETSFSSYLKDLKNRNDAFEQTPVKRLKMKMREDMQTFAYKPKENRLP
GSWCGRKEYKTADVDLTNEGSALVAGLDDLEPVFCADPSAAWRITETNSGGLRSNSTSSS
HSDWAAASSEQEAFGQHVSSAQTPAVTFDLGSEWDDWGDFDDQNLVQASETXGLLCETDH
QCEKYKSAGYGTPSAVSCPQVKPLRTAAPTPLRSISASSSSEIKTFEPSLNTDIPKKRLT
LDLNKKQPNMFSDGIRLKTPDRALKXPEGGPVNRRLDFFLTPSSTNSSLNTSNEEEALFG
IFDGIF
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtcagagccatggagagacgtcaaggctgtgtacgtggcccccatcaaagct
ctctgcagtcagtgcttcgagagctggaggaagaagtttggacctctgggactgaactgc
aaggagctgaccggtgacacagaaattgacgacttctttgagattcacgactcccacatc
atcctgaccacacctgaaaagtgggacagcatgacaagaaaatggaaggataattgtttg
ttgcagcttgtcagactcttccttattgatgaggtgcatgtggtgaaagatgcaacccgt
ggtgccaccttggaagtggtggtgagcaggatgaaggcagttcaaacattcagaacctcc
cagaatccaaaggcggggctctccatgagatttgtggctgcttcagctactgtgcccaac
gtatcagatatagcagattggctttcaaatgaaagtgggccggccacatacctgagtatg
gatgagagccaccgtccagtaaagcttcggaaggtggtgctgggattcccctgcagccag
aaccaaactgagtttaagtttgacttgacgcttaactacaagatggcaaacatcatccag
acgtactcagatcagaagccttcactggtgttttgctcaacaaggaaaggagctcagcag
tccgctgcagttctggccaaagatgctcgttttatcttgagctgtgaacacaaacaaagg
ttgatgaaatatgcacacggtatactggattccaaactaagagagctggtgatgtttggg
attggcttccaccacgcaggagttgatttgtctgacaggaagctggtagaagaagccttt
actctgggacacctgcctgttctttttaccaccaggactctggccatgggcgtaaacctt
cctgctcacctggtggtgatcaagtccacagtgcagtatgtggcaggctcctgtgaggag
tacagtgaggctgacatcctgcagatgatcggccgggccggacgtcctcagtttgattca
tcagcgactgcagtgattatgaccaaggttcaaaccagagacaagtacatgaaakttatg
aatggaatagaaatcattgagagcagcttacacagtcacctggtggagcacctgaacgct
gagattgttctccaaaccatcagtgatgtcaacatggctttagactggatacgctccaca
tttctctacatcagagccctgaagaaccctacacactacggtttctctgctgacttggac
agattcggtattgaagctaagttgcaagaactgtgtctgaagaarctcaacgctctgtca
tccattgatttaatcagcatggatgaggatattaacatcaaaccaacagaggctggcagg
ctgatggcgaggttttgtgttgcttttggcacaatgaaactgatcagcaacgtggtcggc
aacgaaagtttatctgacctgattgagttggtgtcaaagagcagagagttcagtgacatt
cagctgagagtgaacgagaaaagagccctgaacacactgaaccgggacaaaaacagaacc
accatcagatttcctcttgagggaaagatcaaaaccagtgagatgaaagtaaactgctta
attcaagctcatctgggttccatctcgattcaagactttggacttactcaagacacagca
aagatcttcagaattgggatgcgcattagtaaatgcttgtcggagttcrtgagtcatcag
tccaagagtaacttcactgctgttctcaactccctgatcctggctaagtgcttcagagcc
aaactttgggaaaactcaccctacgtctctaaacagctggagaagataggtcagagtctg
tccactgcaatggtcaatgctggactcaccacgttcaccaaaatagaagaaaccaacccc
agagagctggagctgattgtcaacagacatccaccgtttggaaaccaaatcagagagtct
gtgactcacctcccaaagtacagcgttactctggagcagcttcccatgtacagcagcacc
acggctgagattctggtcaaagtgaccctgaagaaccagacggagctgctgtccaggaga
acagctgcagactatcactgcgtctctctgattattggaaactcagacaacaacgtagtc
tttctgcagaaactcaacgatttgttgctgctgaagtgtggcagctggtcgaagaagata
gatgtggcgaagccttccaacggagatgaaatcagtgtcagtctcatcagctcagattat
gtggggctggacgtccatcagcagatcagcgtgttctacccaggtgcccggaggtttgga
agtgaaactcrgtgcagtctgacaggtcctgaagagagaccgccacactctgctgggaaa
cctctgtccacaactcagagagaaagcctctcatctgcaactcaacaagattcaggcagt
aaaagacaatgcaaccatttctgcaagaataagagttgttgcgctcatgagtgttgtaaa
gtaggtgtagcagtgggctggaagagatcagccaatcaggaaaccagtttctcttcctac
ctgaaagacctgaagaacagaaatgatgcttttgaacagacacctgtcaaacgactcaag
atgaaaatgagagaggacatgcagacgtttgcttacaaacctaaagaaaatcgtcttcct
ggttcctggtgtggaaggaaggagtataaaactgcagacgtagacctgacaaatgaaggt
tctgctcttgtagctggactggatgacctggagccagtcttctgtgcagacccctcagca
gcgtggagaatcactgaaacaaacagtggaggtctgaggtctaactcaaccagctcatct
cactccgactgggctgcagcctcctctgaacaagaagcttttggccaacatgtctcatct
gcccaaacaccagctgttacctttgatcttggaagtgaatgggatgactggggggacttt
gatgaccagaacttggttcaggccagtgaaacatktggacttctgtgtgaaacagaccat
cagtgtgagaagtacaagtcagcagggtacggcaccccctctgcagtcagctgtccacag
gtcaaacccttgaggactgcagcaccaacacctctgagatccatatcagcctcttcaagc
tctgaaatcaagacattcgagccatctttgaacactgacataccaaagaagaggctcaca
cttgacttgaataaaaagcagcccaacatgtttagtgatgggatcaggctgaaaacacct
gacagggctctgaaacamccagagggaggaccagtgaacagaaggttggatttcttcctc
acaccgtccagcaccaactcctctctcaacacaagcaacgaggaggaagccttgtttggc
atatttgatggcatcttttag
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integrated database retrieval system
