Austrofundulus limnaeus (annual killifish): 106530008
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Entry
106530008 CDS
T06063
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alim04990
]
106530008
Domain-containing proteins not elsewhere classified [BR:
alim04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
106530008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_10
PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
106530008
NCBI-ProteinID:
XP_013881012
UniProt:
A0A2I4CM06
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
MEAPLQSEDSESLDSCIQKALAALYPPFQATSSTVLCQVLSVVDRCYRGDGLRYLLHFLL
PAKHFLQDLQQVACSPFYGRLFRHEGWPLCLQEKVVVQLCPLDQHLLRPGDFYLLVSPPA
SCRSGVDTSPRLLLCSVSSGSHHVEQQEVPRAALKSLFSMSWLDCVNRERERRGAARLEC
CVLLAHGDVFRVPWEDVVHPQFLGRSQTNPQEDMDSLVKDGDDPNSSRQEVEPLPFHSDQ
SAAGSGGEDSEGEYVELTELPLPRFYPQKGSLTQSISLQNRARTTPNIHTLVTEEQANTH
KYRTEAKNAHANTHANTHANTQSYMTETHANTQPYMTETHANTHANTQPYMTETHANTQT
YMTETHANTQTYTTETHANTQANTHANTQPYMTETHANTHANTQSEMTETHANTHANTHA
NTHANTHKHVTDVYAKTHKHMTDTDANKQANSHDNTHKHVTDTYTNTQANAHSNTCQDVT
DTYANTSKHVTQTHARTHEHSTKTLDCDTHCNTNTQIDSNTHSSDSNTHSSDSNTHSSNS
NTHSCDSNTHSSDSNTHSSDSNTHSSDSNTHSSDSNTHSSNSNTHSCDSNTHSSDSNTHS
SDSNTHSRLLEENLSQDSCGGRLLPPSSSSDPVEDEEKLEVYHHGSSPVQSNVNVSAGTG
PTEPEPSPAASTVQFQSSQSSFYSQLLRSGAVCLPGTKDRGGRALLTVCSLSPVWSNPCC
DSARLLRLLLYYTFTLRKEVRALGLTVLVDARGAAPPSVLFSALRLLQEDTPGSIHSVLI
LTNKDSSLHLNKPASTQVEMLNSIKSLQRHVELQQLPVNFGGSFIFSQNSWISFTSRVDQ
LTHQCKDVIHLLQKSISILQSTPVPADKQGAELLLSRYKAVMGSILEDVRLVQLQREGGA
SLSLLRREEGGDGGMSEEQRAAVEEVSSLYDKVDELLHLLVTLSNAKTQELNFILDFRNL
EQDFSSVKAWLEEVGEVQLKALNEPADSLELLNRRHQDFNDFYPAAYDHCKRGEALLTRL
ERWDDVSSADLSIYEDKVHSFWAQLQDFSQRVKNTGNNINRAVQLYSFLDQAYGWALEGM
RHLAGISMEDCTLPDKCQAVIDSLEEFQQKRPPITDARFQEMKAEAAELQGERGLRQWSF
TWAKCLETRKMFDRKMEAVLRSRDSAHRRRSDSATSRSSISSRKSLSGLWSVQEDSPCPL
EEEDSSSSVFSPSPPTSHRTPLLRRLFRSSSSFDESPERKDGVSPRHARLSSSSSFFSFS
PFSSPSFSPSSRRRQQHLRKTQSFDLPSTPDGSRYSPGPRVLSEPPRRGNTGVFIRGLEV
SSTEAADQILCPRTPTHSWTGQRPHGPRTPGTPAADTHPRGGSRLCHIVEEMVTTEREYV
RSLRYIIHHYFPEMDRADLPQGLRGKRSVIFGNLEKLLDFHSQFFLKELEACWKHPLRVP
HSFLRHEEQFGLYALYSKNKPKSDALLANHGHTFFRRKQLELGDKMDLSSYLLKPIQRMS
KYALLLKDLMKEVGAAEEAELTALQAATNMVKFQLRHGNDLLAMDAIRDCDVNLKEQGQL
IRQDEFTVLSGRRKCQRHVFLFEELILFSKPKKVEGGLDVFIYKHSFKTADVGLTESTGD
SGLRFEIWFRRRTSKNQTYILQAAAADVKHTWTSDIARILWTQATRNKEMRLKEMVSMGV
GSKPFLDIQPSDAAISDRAVHYIMKNKGARTRASIAVSVFDHSQPFRRDPGSSDPAASGP
SSLSLLGPLNLHMYSQSLPAAPPASFSTSCIEEDEQEHETGSQPSMSTESSGSSSRGLSG
STGSDSGCASSHLQEAPLGESGPPSQPSSSSSSSSSNKQHLSSSFMSSKAATVV
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctctacagtcagaggactctgagtctttggacagctgcatccagaaagct
ttggcagccctctatccacctttccaggccacatcctcgaccgtcctctgtcaggttctc
agtgtggtggacagatgttacagaggggacggcctccggtaccttttacacttcctgctg
cctgcaaagcacttcctgcaggacctccagcaggttgcatgttctcctttctacggccgg
ctgtttcgtcatgaaggttggcctctgtgtctccaggagaaggtagtcgttcagctctgt
cctctggaccagcacctccttcgtccaggagacttttacctgctggtttctcctcctgcc
tcctgcaggagcggcgtggacaccagcccccgcctgctcctgtgcagcgtctcgtccggc
tcccatcatgttgagcagcaggaggtgccgagggcagctttgaaatcactcttcagcatg
tcctggctggactgcgttaacagggagagggagcgcagaggagcggccaggctggagtgc
tgtgttctcctggcccacggagacgtcttcagggtcccctgggaggacgttgtccaccca
cagttcctgggtcgctcacaaaccaacccacaggaggacatggactcgttagttaaagac
ggagacgatccaaactcctccaggcaggaagttgagcccctcccattccattctgaccaa
tcagcagcaggcagtgggggtgaagactctgaaggggagtatgtcgagctgacggagcta
ccgctgcctcgcttctacccccagaaaggatctttaacgcagtccatcagcttgcagaac
cgagccaggaccaccccaaacattcacactcttgtgacggaagaacaagctaacacgcac
aagtacagaactgaggcgaaaaacgcacacgctaacacacacgccaacacacatgctaac
actcagtcatatatgacagagacacatgctaacactcagccatatatgacagagacacat
gctaacacacatgctaacactcagccatatatgacagagacacatgctaacacacagaca
tatatgacagagacacatgctaacacacagacatatacgacagagacacatgctaacaca
caagctaacacacatgctaacactcagccatatatgacagagacacatgctaacacacac
gctaacactcagtcagaaatgacagagacacatgctaacacacacgctaacacacacgct
aacacacatgctaacacacacaaacatgttacggacgtatacgctaaaacgcacaaacat
atgactgacactgacgctaacaaacaagctaattcacacgataacacacacaaacatgtg
actgacacatacactaacacacaagctaatgcacacagtaacacatgccaagatgtgact
gacacatacgctaacacttcaaaacatgtgacccagacacatgctaggacacacgaacat
tcaaccaaaacacttgactgtgacacacactgtaacactaacacacagattgacagtaac
acgcactcttccgacagtaacacacactcctctgacagtaacacacactcttccaacagt
aacacacactcttgtgacagtaacacacactcttccgacagtaacacacactcctctgac
agtaacacacactcctctgacagtaacacacactcctctgacagtaacacacactcttcc
aacagtaacacacactcttgtgacagtaacacacactcctctgacagtaacacacactcc
tctgacagtaacacacactccagactccttgaggagaacctcagccaggattcctgcgga
ggccgcctccttcctccctcctcttcctctgatcctgtggaagatgaggagaaacttgaa
gtttaccatcacggctcgtctcctgtccaatcaaatgtcaatgtgtctgctggtactggt
ccaacagaaccagaaccatcaccagctgcctctacagtccagttccagtcctcccagtcc
agcttctacagtcagctgctgcgatctggagctgtgtgtctgcctggaactaaagaccga
ggaggacgagctctgctgaccgtctgcagtttaagccccgtgtggtcgaacccctgctgc
gacagtgcaaggctgctccgcctcctcctctactacaccttcactctcaggaaggaagtg
cgagccttggggctgacggtgctggtggacgctcgtggagctgctcctccctctgttttg
ttctccgccctccggttgctgcaggaggacacaccaggctccatccactcagtgttaatc
ctgactaacaaagactcctccttacatctgaacaaacctgcttccacacaggtggagatg
ctgaactccatcaagtccctgcagagacacgtggagctgcagcagcttcctgtaaacttt
ggaggatcgttcatcttcagtcagaacagctggatcagcttcacatctagagtcgatcag
ctgacccatcagtgtaaggatgtcatccacctgctgcagaaaagcatcagcatcctgcag
agtacacctgtacctgctgacaaacagggagcggagctgctgctgtccaggtacaaggca
gtgatgggcagcatccttgaagacgttcgattggtccagctgcagcgggagggcggagcc
tctctgtcgctgctccgcagggaggagggcggcgacggcggcatgtcggaggagcagcgg
gcggccgtggaggaggtgtcgtctctctacgacaaagtggacgagctgctgcacctcctg
gtcactctgtccaacgccaagacccaggagctcaacttcatcttggacttcaggaacctg
gagcaggacttcagctcggtgaaggcgtggctggaggaggttggagaggtccaactgaag
gctctgaatgaacctgcagattctttggagcttctgaacaggagacatcaggacttcaac
gatttctacccagctgcttatgaccactgtaaacgaggcgaggctctgctgacccgcctg
gagcgctgggacgacgtgtcctccgccgacctcagcatctacgaggacaaggtccactcg
ttctgggcccagctgcaggatttttctcagcgcgtcaagaacaccgggaacaacatcaat
cgggccgtccagctgtactccttcttggatcaggcctatgggtgggcgttggagggaatg
cgccacctcgctgggatctccatggaggactgcacgctcccagacaaatgccaggctgtg
attgacagcttggaggagttccagcagaaacgcccaccaatcacagacgctcgtttccag
gagatgaaagccgaggcggccgagctacagggcgagcgagggcttcgtcagtggagcttc
acctgggccaagtgcctggagaccagaaaaatgtttgacaggaagatggaggcggtgctt
aggtcacgagactccgcccacagacgccgctctgactctgccaccagcagaagctccatc
tcctccagaaagtctctgtcaggactgtggagcgtccaagaggactccccgtgtccccta
gaggaggaggacagctcatcgtctgtcttttctccctccccgcccacctcccaccgcacc
ccgctcctccgccgtctttttcgaagctcctcctcattcgacgagtccccggagcggaag
gacggcgtctcccccaggcacgctcgcctcagctcctcctccagcttcttcagcttctcc
cccttctcctcccccagcttctccccctcctccaggaggcggcagcagcatctgaggaag
actcagagcttcgacctcccctccacgcccgacgggtcgcggtacagcccgggtccccgc
gtcctcagcgagccgcctcgcagggggaacacgggcgtgttcatccgaggtctggaggtc
agcagcacggaggcggccgatcagatcctgtgccccaggacccccacccacagctggacc
ggtcaaagaccacacggtcctcggacccccgggacccccgcagcagacacccaccccaga
ggaggaagcaggctgtgtcacatcgtggaggaaatggtgacgacggagcgcgagtacgtg
cgctcgctgcgttacatcatccatcactacttccctgagatggaccgggccgacctcccg
cagggcctgagaggaaaacgctccgtcatcttcggaaacctggagaagctgctggacttc
cacagccagttcttcctgaaggagctggaggcctgctggaaacacccgctgcgagtgccg
cacagcttcctgcgacacgaggagcagtttggtctctacgctctgtacagcaagaacaaa
cccaaatctgacgccctgctggccaaccatggacacacgttcttcaggaggaagcagctg
gagctgggggataagatggacctgtcgtcctacctgctgaagcccatccagaggatgagt
aaatacgctctgctcctgaaggatctcatgaaggaggtgggcgccgcagaggaggcggag
cttaccgctctgcaggccgccaccaacatggtgaagttccagcttcgccacggcaacgac
ctgctggccatggacgccatcagagactgtgacgtgaacctgaaggagcagggtcagctg
atccgtcaggatgagttcacggttctgagcggcaggaggaaatgtcagcgccacgtcttc
ctgttcgaggagctcatcctcttcagtaaacccaagaaggtggagggggggctggacgtc
ttcatctacaagcactccttcaagaccgccgacgtgggtctgacagagtcgacgggggac
agcgggctccggttcgagatctggttcaggaggaggacgtccaagaaccagacctacatc
cttcaggccgcggcggcagacgtcaaacacacctggacgagtgacatcgcccgcatcctg
tggacccaggccaccaggaacaaagagatgcgactgaaagagatggtgtcgatgggcgtg
ggaagcaaaccattcctggacatccagccgagcgacgctgccatcagtgaccgagcggtt
cactacatcatgaagaacaaaggagccagaactcgggcctccatcgctgtatccgtgttc
gaccactctcagccgttcagacgggaccccggctcctcggaccccgcagcttcaggaccg
tcctccctcagcctgctgggcccgctcaacctgcacatgtacagccagtcgctccccgcc
gcgcctcccgcctccttcagcacctcctgcatcgaggaggacgagcaggagcacgagacc
ggcagccagccttcgatgagcacggagagctccggctcctcgtctcgcggcctctccggg
tccacgggctctgacagcggctgcgcctcctcgcacctgcaggaggcgccgctgggggag
tccggcccccccagccagccttcctcctcctcctcctcctcttcctccaacaaacagcac
ctctccagcagtttcatgtcttctaaagctgctactgttgtctga
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integrated database retrieval system
