KEGG   Austrofundulus limnaeus (annual killifish): 106530063
Entry
106530063         CDS       T06063                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106530063 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alim03400]
    106530063 (xrcc1)
DNA repair and recombination proteins [BR:alim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106530063 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 106530063
NCBI-ProteinID: XP_013881074
UniProt: A0A2I4CM61
LinkDB
Position
Unknown
AA seq 624 aa
MPEIKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARAGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAARDQDYEVLLVTSSFMSPTESRNGTNMSRVRFFGPNQLQKSTA
QEKWDRVKIVCTQPYSKSIEYGLAFVKFHSPPDKNEPPASSPKLTKLGQFKVKDESPSSG
NLQPGSLFFSRDNVTKSSTSPKVSPQGDKLSYAAAALQAGGNSHSSGQASTSNTASPQPP
AKRKFEFSKERQSAPGPPPSKKMSPTASPDTKPTTPKHKPSPVSTPSPSTSKAQKSAEKK
KESRPKPEPKPKPKPKSKSEQQVPFHRIMEGVVFVLSGFQNPFRGEIRDKALEMGAKYRP
DWTPDATHLICAFANTPKYSQVKSVGGIIVRKEWVMECHKRKQKISYKRYLMDGAESSSE
SEMEVDEESEEEMKTKTPQKQERQATPKKTPEKKDEVDEYGGSTDVDEPGDEDDDNDESG
LETEDELQRMEERRQRKAAEGETSVKDEDPYGGSTDENTDAEAEEEHPIPELPDFLNGKH
FFLYGKFPNNERRLVLRYIVAFNGVIEDYMSDKVQFVVTSEGWHDSFEDALMENGNLNFV
KPAWIYAINERQKLLPYQPYTVVP
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaactgaagcatgtggtgtcctgcagctcagaggataatactcacaaa
gcagacaacctgctgagctcagacacctacaggaagtggaaagcagccagagccggtgag
aagcagacgtctgtcatcctgcagtttgagaaggaggagcaggtgcacagtattgacatt
gggaatgaaggctcagctttcattgaggtgttggtggggaactcttcggctgccagagac
caggactatgaggttcttctggtcacatcctccttcatgtcacccaccgagagccgtaat
ggcaccaacatgagcagagtacgtttctttgggccgaaccagctgcagaaaagcacggct
caggagaagtgggaccgagtaaaaatcgtgtgcacccagccttacagcaagagcattgaa
tatgggcttgcctttgtcaagttccattcaccacctgacaaaaacgagccgccagcgtcc
tcccctaaactaacaaaactgggacagttcaaggtgaaagacgagtctccttcgtctggc
aaccttcagcccggcagtctgttcttcagccgagacaacgttaccaagtccagcacttca
cccaaagtgtctcctcagggtgacaagttgagctacgctgctgcagctctgcaggcggga
ggcaactcccactcatcaggtcaagcctccacctccaacactgcctcaccacagccacca
gcaaaaagaaagtttgagttcagcaaagagcgacagtctgcccctggtcctcctccgtca
aagaaaatgagtcccactgcatcacctgacaccaaacccacgacccccaaacacaagccg
agccctgtcagcacacccagccccagcacctctaaagcgcaaaagtctgctgagaagaag
aaagagagccggcccaaaccggaacctaaacctaaaccaaagccaaaatccaaaagtgaa
caacaggtgccatttcaccggatcatggagggggtggtgttcgtcctcagcggcttccag
aaccctttcagaggggagatcagggacaaggcgctggagatgggagcaaagtatcgaccc
gactggacacctgacgccacacaccttatctgtgccttcgccaacactcccaagtacagt
caggtgaaatcagtaggtggcatcattgtgcggaaggagtgggtgatggagtgccataag
aggaaacagaagatttcctataaacgctatttgatggatggagctgagtctagctcagag
agtgaaatggaggtggacgaagagagcgaagaggaaatgaaaacaaagactccacagaag
caggagagacaagcgacccctaaaaagaccccagaaaagaaggatgaggttgatgagtac
ggtggttctactgatgtggatgaaccaggagatgaagatgatgataatgatgaatctgga
ttagagacagaggatgagctgcagaggatggaggagaggcgacagaggaaagcagcggaa
ggggaaacgtcagtaaaagacgaggatccatacggagggtcgacagatgaaaacacagac
gctgaagctgaagaggaacatcccatccccgagctaccagatttcctgaatggaaagcac
tttttcctctacggtaaatttcccaacaatgagagacgattggtgctgcggtacatcgtc
gcctttaacggagtgatcgaggactacatgtcggataaagtgcagtttgttgtgaccagt
gaaggatggcacgattcttttgaagacgcactgatggaaaacggcaatctgaactttgtg
aaaccagcgtggatttatgcgatcaatgaacgacagaaactgctgccctaccagccttac
accgtcgtgccctga

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