Austrofundulus limnaeus (annual killifish): 106530231
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Entry
106530231 CDS
T06063
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530231
03036 Chromosome and associated proteins [BR:
alim03036
]
106530231
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106530231
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106530231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
106530231
NCBI-ProteinID:
XP_013881271
UniProt:
A0A2I4CMQ3
LinkDB
All DBs
Position
Unknown
AA seq
2103 aa
AA seq
DB search
MDENKRVTVATSVQEQQFMEDKKRKKDEKRKREASQKVAEQKNKVPELTKPTSAQSPASQ
SSSASPSRGPTPTASPSPATSGPGSAATPSQGGNNAKRLAVANGQPTSSSSSSTGGPSAA
GNGSTSSGGGTQAPQQPSRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLVGGGGDDSS
SNGAAVSDSGMATSSLTLTSSVAASTTNSNYANSMWGPSSGSQATSQGREKVIVDGNDLE
EWPSIPGTDGGNSSNNGMPVNSVSASGNQSSSTSSFSLPNECMQSSNSVVWGATASQGHL
GGGTAVAAAGSLLQQSSSLSKASTVPGSHDASGPIDRSSGIPGANFSPNANPSAWPALVQ
QDDPDASGEEGLTSFHHQSSGGSAINSASLGLGGGAAGVLGNHPSISVNQSNAHQQQLHQ
MQSRDLGGGKWDNESAGPKIAGGGGFGGGIDRGMGRSGINAGEPNSATSWRGQPPFPAAY
SKTGASKIDGWESGGSGGLGALEGDKETSGWGYPSSTSGVDAWGNVEKEGNDGQTSKASQ
GGWGSGVGGDKGISGSDWGGNSAGIGGANLGGDEIGTCSSNSSSSGGSTAGNPLPTSSTS
STVTTTTRAWDNQKGEGETREWGDRLEGQGALGGSSSSGGNSRSESGFNNNNNNRLRRQA
PTAETALQSLLSRSDLDPRVLSNSGWGQTQIRQNTSWDIDDYAGHNKGGHSSAPSKPTSS
HGGPTQYFSGPKTLSTDSMGPGVNPSLLPSTGSSGEGCENSSSSGASLSGRGPPPTCSNM
KNHGVQQSGPLTTTAPCMGSGVIPGPSQQTNATGWVGGRNDPEAKGWLNEEWKGSNRGEK
GGGGWGDIGKQSDSIRGGWRESQQEKGTGGWKEMGGNGEGSGWGAEQKVGTSKNWLEQES
KSSNKGGAWDDEMRNGRRSVGDSGVGVWGSWDDSAPRRTWGAGGTGVGGSGGGVDGDGDT
GSKPHHNWSGGSKMHQMPNSQSGSVSGPQAQLQQQQSQPRNQHPQLQPALDQGAMQGGAG
RKLISQAQSQNQSSGWTSGPIPGGSRGGGSESEPSGWEEPSPQSISRKSEIDDGTSAWGD
PTHYNYKPVNLWDKNSGPAGQQSHGQGQQRQHQQQRPPVQQQPSRQTTGLGGNRDLNTAQ
GSAKPSVMDPSGWGSTSPSSPTVDNGTAAWGKSSDAPTGWGDPDDAGGKTACWGNPLANS
ARSGSKSMQDGWGEKESSVTASRHSSWEDEEDGGGMWNSTGSQGSSSSWGQGSNGGWGQN
QTVKKASNKVPLKAGGGDSWMSPTTRQFSNMGILNDEPSGPNLDLAPGSLQDKKIEAEKR
SMGMSDYNGDIRKAGRGGSNGGGVIYCPPGSKEAAPGDAGSYYNRALHLVHQEGCPGEAG
SCSLYSPPTVYKPHTLFNHSVPFRQGGQNIFGSTGGMTHSRHQQSVPPMNQSPGMRAQVP
HQFLPPQVQGSVLKQMPPSSSSAGGVSGMGGMGGVGGGVFPLQLSPQQIAMLSFYPPQIQ
FQLACQLLLQQQQTPQQMLQNQRKFPPNVRQQADPQQLARIMAALQQQRQFQQAGGLGGS
SKLSPSHQGGAGPKLPSAETLPHPGLAGSVADMQQKTLGSYSGFGSGGNLTGLDLGGSIV
GGPGAMKDSGAQQSRFKWMMEGNCSPDTSSPENLYHKNGPVTPIKMPGSSQFSHYDMMVG
DGSGDTWHRTPGNKISAKPTNTPSWPPEFQPGVPWKGIDRVDPESDPYMTPGSMMGNAVS
PGLNDTEHQLLQDNTDSTPSLNTLLPSPCAWPYSASESPLSNAHNSAKYTDYKTSWPPEP
IGHKSWKASRCSSQAQLSRPPPGLASQKQPTSPSFWSGGAPRLAGRGWGSGSSNTGSTWS
GGSSRESCWLVLSNLTPQIDGSTLRTICLQHGPLLTFHLGLTQGTALIRYSSKQEAAKAQ
SALHMCVLGNTTILAEFVSEEDVGRYIAHLGGAGSEGTSAGSAGLEPTTSSSIRSSSNGG
NCERSGAGSGGVEGGGGEGVSPVGGAMSSSSGWHSLNSTDSSSDHTAPQGPGLGIFTQWS
SNGTGVVGGAQDGRQGLWGGMSGAGYPSSSSLWGSPALEDRHQMGSPASLLPGDLLGGGA
DSI
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacaaacgtgtgacagtagcaacatctgttcaggagcagcagttcatggaa
gacaagaaaaggaaaaaagacgaaaaaaggaaaagagaagcctctcagaaggttgcagag
caaaagaacaaagtgccagaattgacaaagccaacttcagcccaatctcctgcctctcag
agcagctctgcatcccccagccgtggacccacgcctactgcctctccatcccctgcaacc
tcaggcccaggcagtgctgccaccccgtctcagggcggcaacaatgctaagcgcctggca
gtggccaacggacagcccacctccagtagttcttcctctactggcggacctagtgctgct
gggaacggcagtacaagtagtggaggcggaactcaggcgcctcagcagccgtcacgatac
atgccgagagaggtgccgccacgattccgctgccagcaagaccataaagtgctgctgaag
aggggacagccaccactgtcctccatgctgctggtaggaggaggaggggatgattcgagc
tcaaacggggctgctgtttcagattctggcatggctacatcttcattgacgctcacctca
tcagttgctgcttctacaactaattctaattatgcaaattccatgtgggggccaagctca
ggcagccaggccacctctcaaggcagggagaaggtcattgttgatggcaatgatctcgag
gagtggccgagtataccgggcactgatggaggaaacagcagcaacaatggaatgcctgtg
aacagcgtcagtgcctctggcaaccaatcttcatctacttcatctttctctttgcccaat
gaatgtatgcagtcatccaacagcgtggtgtggggagcgactgcctcccagggtcatctt
ggaggaggtactgcagtagctgctgctgggtctctgctacaacagtcctcctcactttcc
aaagcctccactgtgccagggagccatgatgccagtggccctattgatcgtagcagtggg
attccaggtgccaacttcagtccaaatgccaacccttcagcctggcctgccctggtgcag
caggatgaccccgatgcttcaggggaagaaggtctgacttcctttcatcaccagagctct
ggagggtctgccataaactctgcttccttggggctgggaggtggggcagctggggtgctg
ggaaatcacccatctatatctgtgaatcagtcaaatgcccatcagcagcaacttcaccaa
atgcaatccagagacttgggaggggggaaatgggacaatgaatcagcgggaccaaaaatt
gcgggtgggggagggtttggaggagggattgaccgtggtatgggaagaagtgggataaat
gcaggagaaccaaactcggccacctcgtggagaggccagcctcccttccctgctgcttac
tccaaaacaggtgcctcaaagattgatggatgggagagtggaggaagtgggggtttagga
gctctagagggtgataaagagacttcaggttggggatatccaagttccactagtggagtt
gatgcttggggcaatgttgaaaaggagggaaatgatggtcaaacctccaaggcatctcag
ggagggtgggggtcaggagttggaggcgataaaggaatttctggtagtgattggggtggg
aactctgccggcattggtggagcaaatttaggaggtgatgaaatcgggacctgcagtagt
aatagcagcagcagtggaggaagcacagcgggcaacccacttcccacttcctccacctct
tcaacagtcaccactacaaccagagcctgggacaatcagaagggagaaggtgaaacaaga
gaatggggtgatcgattagaaggacagggagcactaggagggtcttcatctagtggtgga
aattccaggagtgagagtgggtttaataataataataataatcgtcttcgccgacaggca
cctacagctgaaactgccttacagagcctgcttagtcggtctgatctagaccctcgagtc
ctgtccaactcaggctggggccaaacacaaatccgacaaaacacatcctgggatattgat
gactatgcaggacacaacaaaggtggacattcatcagcaccatcaaaacccacatcgtct
catggtgggcctactcagtattttagtggccctaagaccctaagcactgattctatgggt
ccaggggtcaatccctccctgcttccttctactgggtcttctggagaaggctgtgagaac
agcagcagcagtggggcctctttgtctgggagaggcccaccacctacatgcagcaacatg
aagaatcatggtgtccaacaatctgggccattgaccacaaccgctccttgtatggggtct
ggggtaataccagggcctagtcagcagacaaatgctacaggctgggttggaggcagaaat
gatcctgaggccaagggttggttgaatgaggaatggaaaggcagcaacagaggagaaaag
gggggaggaggatggggtgatattgggaagcaaagtgactccattcgtggaggctggaga
gaaagtcagcaggagaaaggaacgggtggctggaaggaaatgggagggaatggagaagga
agtgggtggggagcagagcagaaggttggcaccagcaaaaactggttagaacaagagtcc
aaatcaagtaacaaggggggagcttgggatgacgagatgagaaatggaagacgctcagtt
ggagattcaggtgtaggtgtttggggaagctgggatgacagtgcacctcgaagaacctgg
ggagcagggggtactggagtaggaggcagtggaggaggagttgatggagatggagacacg
gggtccaaacctcaccataactggagtggaggaagcaaaatgcaccagatgccaaacagc
cagtcgggctctgtttcaggcccacaggcacaactgcaacagcaacaatcacagccccgc
aatcagcatccacagctgcagccagcgttggaccaaggggctatgcaagggggtgctggg
aggaagctcatctctcaagcccagtcacagaaccaaagctcaggctggacctctggacct
atacctggtggttccagaggaggtggcagtgaatctgaaccaagtggctgggaggaaccc
tcaccgcagtctataagcaggaaaagtgagattgatgatggaacgtcagcatggggagat
ccaactcattacaattacaaaccagtcaacctgtgggataaaaacagtggacctgctggc
cagcaatcacatggtcaaggtcagcagcggcagcaccagcaacaaagacctcctgtgcag
cagcagcccagcaggcagaccacaggccttggaggcaacagagacctgaatactgctcaa
ggatctgcaaaaccttctgttatggatccatcaggttggggaagcacttctccatcaagt
ccaacagtagacaatggcacagccgcttggggaaaatcaagtgatgctcccactggctgg
ggagaccccgatgatgctggagggaagactgcatgctggggaaatcctctggcaaactca
gctagatctgggtcaaagtctatgcaagatggctggggggagaaggagagctcagtaaca
gcctcacgtcattcgagctgggaggatgaagaggacggaggagggatgtggaacagcact
ggctcccagggaagcagctcatcctggggacagggaagcaatggaggctggggccaaaac
caaactgtaaagaaggccagcaataaggttcctctgaaagctggtggaggtgattcatgg
atgagccccaccaccagacagttctccaatatgggaattctgaatgatgagcccagtggc
ccaaacctcgacctggctccaggttctcttcaggacaagaagattgaagcagagaaaaga
agcatgggaatgagtgattacaacggtgacatcaggaaagcaggaagaggaggaagcaac
ggagggggagtgatttattgccctcctgggtccaaagaagcggcaccaggggatgcaggg
tcttactataacagggccttgcatttggtccatcaggaaggctgccctggggaggcgggt
tcttgctctctgtactcgccacccactgtgtacaagccccataccctcttcaaccactct
gtcccctttagacaaggtggtcagaatatatttggcagcacaggaggaatgacccactca
agacatcaacaaagtgtcccaccgatgaatcagtcccccgggatgcgagcacaagtgcct
catcagttcctgccacctcaggtacaaggttctgtgctgaagcagatgccaccttccagc
agtagcgcaggaggtgtcagtggcatgggagggatgggaggagtcggcggaggtgtgttt
cctcttcaactgtcccctcagcagattgccatgctcagcttctacccacctcagatccag
tttcagctggcttgtcagctcctattgcagcaacaacagactccacagcaaatgctgcaa
aaccagaggaagttcccacctaatgttcgtcagcaggctgaccctcaacagttggccagg
atcatggcagccctccagcagcagaggcagtttcagcaggctggaggtttaggtggcagc
tccaaactctccccctcccaccaaggcggagcgggtcccaaactacccagtgctgaaact
ctgccccacccaggcctggctggatcagtggctgacatgcagcagaaaactctgggctca
tactctggatttggttctgggggaaacctcactggtctggatcttggtggctcaatagtt
ggggggccgggagccatgaaggactcaggagctcagcagtctcgcttcaaatggatgatg
gagggaaactgttctcccgatacttcttctccagaaaatttgtaccacaaaaatggtcct
gtaacccccataaagatgcctgggagctcacagttttcccattacgacatgatggttgga
gatggatcaggtgacacctggcaccggacccctggcaacaaaattagtgccaaacctacc
aacacaccaagctggcctcctgagttccagcctggtgttccatggaagggaattgatcga
gttgatccagagtctgacccctacatgaccccagggagcatgatgggaaatgcagtgtcc
cccggtctcaatgatacagagcaccagttgttacaagataatactgattccaccccttcc
ctgaacaccttgctgccttcaccctgtgcctggccctacagtgcctcagaaagccccctc
agcaatgcacacaactcagcaaagtacacggactacaagaccagctggcccccagagccc
attggacacaagtcttggaaagccagtcgttgcagcagccaggcccagttatcccggcct
cctccaggacttgccagtcaaaagcagccaacgtcgccttctttttggtcgggaggggcg
cctcgattggctggccgaggctgggggagtggctctagcaacacgggctcgacctggagt
ggcgggagctctcgggaaagctgctggttggtgctcagtaacctcacaccacagattgat
ggctcgactctgaggaccatctgcctgcagcacggccccttgctgacctttcacctcggc
cttacccagggcaccgctctgattcgctacagctctaaacaggaggcagccaaagctcag
agtgcccttcacatgtgtgttctgggtaacaccaccatcttggcagagtttgtgagtgag
gaggatgtggggcgctacattgcacatttaggaggagcagggagcgaaggaacctcagct
ggctctgcaggcttagaacccaccaccagctccagcatcagatcgagcagcaacggaggg
aactgcgagaggagcggagcaggaagcggtggcgtcgaaggaggaggaggggagggcgtg
tccccagtcggaggagccatgtcttccagctcagggtggcacagtctgaacagcacagac
agctcatcagaccatactgccccccaaggacccgggctcggaatcttcacccagtggagc
agcaatgggaccggagtggtgggaggagcacaggatggaaggcagggtctgtggggaggg
atgagcggggcaggttaccccagcagcagcagcctctggggctctccggcacttgaggat
cgtcaccagatgggcagccccgcctccctgctgccaggggacctgctgggcgggggggct
gactccatctga
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integrated database retrieval system
