Austrofundulus limnaeus (annual killifish): 106530335
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Entry
106530335 CDS
T06063
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106530335 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106530335 (gtf2b)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
106530335 (gtf2b)
Prokaryotic type
Archaeal type
TFB
106530335 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
106530335
NCBI-ProteinID:
XP_013881389
UniProt:
A0A2I4CN27
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MASTSRGEALALPRVQCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgcggagaagctttggccctgccgagggttcagtgtccaaaccac
cccgaagccattctggtggaggactacagagcaggggacatgatttgtcctgaatgtggc
cttgttgtaggtgaccgtgttatcgacgtgggctcagagtggaggacgttttccaacgag
aaagctctgaaagatccctccagagtgggagacgctcagaacccgctgctgaatggagga
gacctcaccaccatgattagcaagggaacrggagctgccagttttgatgaatttggcaac
tctaagtatcagaaccggcggaccatgagcagctctgaccgggccatgctgaacgccttt
aaagagatcagcaccatggccgaccgcatcaacctgccaagaaacattgtagacagaaca
aacaacttattcaagcaggtttatgaacagaagagtctgaagggccgagccaacgacgcc
atcgcttcagcctgtctctacatcgcctgcagacaggaaggagttccccgaaccttcaaa
gagatctgtgccgtctccaggatctccaagaaggagatcggccgctgcttcaagctgatc
ctgaaggcgctggagaccagcgtggacctgatcacgacgggcgacttcatgtcccgcttc
tgctccaacctgggcctacccaaacaggtgcagatggctgccaccttcatcgccaggaag
gccgtggagctggacctggtgcccggcaggagccccatctctgtggctgcagcagccatc
tacatggcctcccaggcctcggcagagaagaagacccagaaagaaatcggagacatcgca
ggcgtggcagacgtgacgatcaggcagtcgtaccgactcatctaccctcgagctgccgaa
cttttccctccagacttcaaattcgacacgcccgtggacaaactgccccagctgtga
DBGET
integrated database retrieval system
