Austrofundulus limnaeus (annual killifish): 106530339
Help
Entry
106530339 CDS
T06063
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106530339 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106530339 (trim54)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106530339 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_6
zf-RING_5
zf-RING_10
zf-RING_2
Zn_ribbon_FGT1_2
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
106530339
NCBI-ProteinID:
XP_013881391
UniProt:
A0A2I4CN26
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MSSAPRSRAGPEPGASSTMENLEKQLICPVCLQIFSKPVVILPCQHNLCRRCAGHAFQTA
NPLWSQPRSPSSITSSSGRFRCPSCHHEVVLDRHGVYGLQRNLLVENIIDIYRQQEASRL
VSRKHQQLMCEEHEEEKINIYCLSCQTPTCSMCKVFGQHKDCSVAPLGTVYMRQKTELSD
GIAVLVASNDHIQEMISQMEEICLSIEENGRSQREHIAEQMDRLVMLLEERKQELVGFIS
RQQDDKMRHIQGLVCQLNTRLEASATLVELAIRSMEETRQASFIQSSTIILEKMAEVSRT
SRLERLEIGYESLDHFTIDTEHISDLLKNMNFCFCSGDEENLEEEEEEEEEEFKD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgctcccaggtccagagccggtcctgagcccggtgccagcagcaccatggag
aacctggagaagcagctgatctgccccgtctgcctgcagatcttctccaagccggtggtg
atcctgccctgccagcacaacctgtgccgcaggtgtgccggccacgccttccagacagcc
aaccctctgtggtctcagcctcgcagcccctccagcatcacttccagcagcggccgcttc
cgctgcccgtcctgccaccacgaggtggtcctggaccgccatggagtctacggcctgcag
aggaacctgctggttgagaacatcatcgacatctacagacagcaggaggcctccaggctt
gtgagcaggaagcatcagcagctgatgtgtgaagaacacgaagaggagaagatcaacatc
tactgcctgtcctgccagacgcccacctgctccatgtgcaaagtgttcggacaacacaaa
gactgcagcgtggctccgctcggcaccgtctacatgaggcagaagacggagctgagtgat
gggattgcagtcctggttgccagtaacgaccacatccaggagatgatctctcagatggag
gaaatctgcctcagcatcgaggaaaacgggcgcagtcagagagaacacatagccgagcaa
atggaccgcctggtgatgttgttggaggagaggaagcaggagctggtcgggttcatctcc
aggcagcaggacgacaaaatgagacacatccagggcctggtgtgtcagctgaacactcgg
ctggaggcctccgccacgctggtggagctggcgatccggtccatggaggagacacgccag
gcttcgttcatccagagttcaacgatcatcctggaaaagatggccgaggtgagcaggacc
tctcgcctggagcgactggagatcgggtacgagagcctggaccacttcaccatcgacacg
gagcacatctctgaccttctgaagaacatgaacttctgcttctgttcgggggatgaagaa
aacctggaggaggaggaggaggaggaggaggaggagtttaaagactaa
DBGET
integrated database retrieval system
