Austrofundulus limnaeus (annual killifish): 106530386
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Entry
106530386 CDS
T06063
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04137
Mitophagy - animal
alim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106530386
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106530386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530386
03009 Ribosome biogenesis [BR:
alim03009
]
106530386
04131 Membrane trafficking [BR:
alim04131
]
106530386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106530386
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106530386
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106530386
Membrane trafficking [BR:
alim04131
]
SNARE
SNARE associated proteins
Others
106530386
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106530386
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106530386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_2
AAA_5
Vps4_C
AAA_33
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Parvo_NS1
AAA_28
Mg_chelatase
ResIII
nSTAND3
DUF815
IstB_IS21
AAA_7
AAA_18
Viral_helicase1
AAA_lid_PRS2_C
Sigma54_activat
PhoH
AAA_24
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
106530386
NCBI-ProteinID:
XP_013881442
UniProt:
A0A2I4CN90
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MPGSGGADSKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLSQNKTEELQLFRGDTVV
LKGRKRRQTVCIILTDETCGDERIRINRVTRNNLRVRLGDVISIHACPDIKYGKKIHILP
IEDTIEGLTGNIFEVFLKPYFXEAYRPIHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGQPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAENNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLEKIATETHGHVGADVAALCSEA
ALQAIRKKMTLIDLEDETIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
IGGLNEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYXPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDKPSRTAILK
ANLRKSPVAKDVDLEFLSGITEGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSESHGSGSGSGTERPSLYREEXDDDLY
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagactcgaagggagaagatttctccaccgccatcctgaag
cagaaacacagacccaacagactgattgtggatgaagccctcaatgaagacagcagcatt
gtcagcctgtcacagaataaaacagaggagctgcagctgttccgcggagacaccgtggtg
ttaaagggccgaaaacgcaggcaaacagtgtgcatcatcctgaccgacgagacctgtgga
gatgagaggattcggataaaccgagtgacgcgcaacaacctgcgtgttcgactcggcgat
gtcatcagcatccatgcctgcccggatatcaagtacggaaaaaagatccacatcctcccc
attgaagacaccatcgagggtctgacagggaacatctttgaggttttcctcaagccatac
ttccwagaggcttaccggcccatacacaaaggggacatctttttggtgagggggagcatg
agggctgtggagttcaaggttgtagagacggaccccagtcctcactgtatcgtggcccca
gacactgtcatctactgtgaaggacagccaatcaaaagagaggatgaagaggagagtctg
aatgacattggctacgatgacatcggaggctgtcgaaagcaactggcacagatcaaagag
atggtggagcttcctctcagacacccaggactcttcaaggcgataggagttaagcccccc
agaggtatcctgctttacggccctgcaggcacagggaagaccctggtggcccgagctgta
gccaatgaaacgggggctttcttcttcctcattaatggtccagagatcatgagcaaactg
gcaggagagtcagaaagtaacctaagaaaggcatttgaggaagcagagaacaatgctccg
gctatcatcttcattgatgagttggatgctattgctcccaagagagaaaagactcacggg
gaagtggagaggcgtattgtgtcacagcttctgaccctgatggatggcttgaagcagaga
gctcatgtggttgtcatggccgcaacaaaccgaccaaacagcattgatcccgctctcagg
cgattcggcaggtttgatcgtgagattgacattggaatcccagattcaaccggaagattg
gagatcctgcagatccacaccaaaaacatgaaactggctgatgatgtcgacctggagaag
attgctacagaaacccatggacatgtgggcgccgacgttgctgctctgtgctcagaagct
gctctgcaggccatcagaaagaagatgacgctcatcgatctggaggaygaaaccatcgat
gccgacctgctgaactcactggctgtcaccatggaygacttccagtgggcgctgagccaa
agcaacccatcagctctgagagagacggtggcagaggtgcctcaggtcaactgggaggac
atcggaggactgaacgaggtcaagagagaacttcaagagctcgttcagtaccctgtggag
tatcctgacaagttcctgaaatttggaatgaccccatctcgtggggttttgttctatgra
cccccaggctgtggaaaaacgcttttggcaaaggccatcgccaatgagtgtcaggcaaac
ttcgtctccatcaaaggccccgagatgctcaccatgtggtttggagaatctgaggccaat
gtcagagacgtgtttgataaggcaagacaggcagccccctgcatcttgttcttcgatgaa
ttagactccattgctaaatccagaggcggaggagcaggagatgcaggtggtgcagctgac
agagtcatcaatcagattctaacagagatggatggcatgtccgacaaaaagaacgttttc
atcattggtgcaacaaacagaccagacatcatagacccagccatcctgcgaccgggtcga
ctggaccagctcatttacatcccgcttccggacaaaccgtctcgcacagcaattctgaaa
gccaacctacgtaaatcacctgttgcaaaagatgtggatttggaattcctgtctgggatc
acagaagggttctccggagcagacctgacggagatctgccagcgggcctgtaaactggcc
atcagggaggccattgaggctgagatcaaggcagagcgccagagacagacaagaccaggc
atccctatggatgaggactttgatccagtccctgagatcaggaaggaccactttgaggaa
gcaatgcggtttgctcgtcgttccgtcagtgacaacgatattcgcaagtatgagatgttt
gctcagactctgcagcagagccgaggatttggaaattttaggttcccctctgctactggt
acccgctctgaaagtcatgggtcaggttctggttctggaacagagaggcccagtctgtac
agagaggaagkggacgatgatctctactag
DBGET
integrated database retrieval system
