Austrofundulus limnaeus (annual killifish): 106530606
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Entry
106530606 CDS
T06063
Symbol
smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530606 (smg8)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106530606 (smg8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
106530606
NCBI-ProteinID:
XP_013881711
UniProt:
A0A2I4CNZ2
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MKEANMSLPVSVGALLQAEPREDAAHRDDGLCVVGIFGKSNTQPEPMKESLINALADKHV
FSLFGGAEDDTADSHIQAFYNQEDRVLYLLLSSVSDSRQLLRACRSLSAGLSHSDAHDIW
KGLDRQHCLHLLYMFSVCHVLLLVHPSQTFDVTYDRVFRALDALRQKVLPLIRAAIKDCP
VSKEWKLNCRPCPPRLLFVFQMTASLKVSTNGSDSGGNPDKLKKHSPRRRLQHALEDQIY
RIFRKSRVLTNQSSNCLFTVPANQAFVYVIPAADKDPVGTLLGQLRSNCILSEQDPVVSV
SGPRRYQQMRRSARQPSFGGDSMGSLGGSQLVDCSLKEFLWQHVELVLTKKGFDDSVGRN
PQPSHFELPTYNKWVQVASKLFQVLITNTDEDVAELATKVQSQAKVLDGFLDADTKFSEN
RCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYAVQLHEDCFKF
WSNGHQLCEERSLTDQHCVHKFHLLPEPGEKPDLDHNPPIMNHNSRGRSTSSCNCGRKQA
PRDDPFDIHAANYDFYQMLEEKCCGKLEKIQFPVFQPSTPDPAPASNQTQRLPSEASGDA
ERLKEASTAQSHTPGDTSLSLALSLGQSSDSLGPYGDGEGPENQVQPKRPSLIDRQPSTV
EYLPGMMHSSCPKGLLPKFSSWSLLKLGPAKTYNCHTGLEQPGFLPGSSFLLPWDLVIRS
RSEEDTGLTEPLDGGPSSWPAPNKSLVGKRGSAGDLGRRRRDDMARVFVGFEYEDSRGRR
FISSGPEKIVKALGPGGAKDPATRVLNTDMPLYVPAPSQGRGLKPHFAQLARLFIVVPDA
PLEITLHPQVQPGPPPCPIFYTEQSEVVLPPDGFWVLRFPYSYATERGPCFPPKENQPLS
NFKVLRGILRAAAAANPPPP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagcgaacatgtcgctgccggtgagtgtcggagctctgctccaggcggagccc
cgggaggacgctgctcaccgggacgacggtctctgtgttgtcggtattttcggtaaaagc
aacacgcagccggaaccgatgaaggagtccctcatcaacgccttggcggacaaacacgtc
ttctcgctgttcggtggtgcggaggacgacacggcggacagccacatccaggccttctac
aaccaggaggaccgggttctgtacctgctgctgtcctccgtgtccgacagccggcagctg
ctgcgggcttgtcggtctctgagcgccgggctcagccactccgatgcccacgacatttgg
aagggcctggaccggcagcactgcctgcacctgctctacatgttctccgtgtgccacgtc
ctgctgctggttcaccccagccagaccttcgatgtgacctacgaccgtgtgttcagggcc
ctggacgccctgcggcagaaggtgctgcctctgatccgggctgccatcaaggactgcccc
gtgtccaaagagtggaagctgaactgcagaccctgtcctccgcggctgctctttgtcttc
cagatgaccgcgtctctgaaggtctccacaaacggttccgactctggaggaaaccctgac
aaactgaagaagcactctccgaggcggcggctgcagcacgctctggaggaccagatttac
cggatcttccgtaaaagcagagttctgaccaaccagagcagcaactgtttgttcaccgtg
cccgccaaccaggcttttgtgtacgtgatcccggcagcggacaaggacccggtgggcact
ctgctgggccagctgcggtccaactgcatcctgtcggaacaggaccccgtggtgtctgtg
tcggggcccaggcggtaccagcagatgcggcggtcagcccggcagcccagcttcggtgga
gactctatgggctcgttggggggcagtcagctggtggactgcagcctgaaggagttcctc
tggcagcacgttgaactggttctcaccaaaaaaggctttgatgacagcgtcggccggaac
ccacagccgtcacactttgagctgccgacctacaacaaatgggtccaggtcgcttccaaa
ctcttccaggttctgatcaccaacacggacgaagacgtggcagagctggccaccaaagtg
caaagccaggcgaaggttttggacggttttcttgatgccgacacaaagttttctgagaac
aggtgccagaaagctctgccgctggcccacagcgcctaccagtccaacctgccgcacaac
tacaccaccacggtgcacaagaaccagctggcacaggccctgcgggtctacagccagcac
gcccgcggcgtggccttccagcgctacgccgtgcagctccacgaggactgcttcaagttc
tggagcaacggccaccagctgtgtgaggagaggagtctgacggatcagcactgcgttcac
aagttccacctgctgcctgagccgggagagaagccagacctggatcacaacccgcccatc
atgaaccacaacagcagggggcgctctaccagctcctgtaactgtgggcggaaacaggct
cctcgcgacgatccgtttgacatccacgctgcgaattacgacttctaccagatgctggag
gagaagtgctgcgggaagctggaaaagatccagtttcctgtgtttcagcccagcaccccc
gacccggctcccgcctccaaccagactcagcggctcccctccgaggcgtcgggcgatgca
gagaggctgaaggaggcgagcaccgctcagagtcacacgcctggagacaccagcctcagc
ctggctctcagtctgggtcagtccagcgacagcctggggccgtatggggacggggaagga
cctgaaaaccaggtccaacccaaaaggccragtctcattgaccgtcagccctccaccgtg
gagtatctccctggtatgatgcactccagctgccccaaaggccttctgcccaagttctcc
agctggtctctgctcaaactgggcccagcaaagacatacaactgccacacgggcctggag
cagcccggtttcctccccggctcctccttcctcttaccgtgggacttggtgattcgctct
cgatcggaggaagacacgggactgacggagcctctggacgggggtccgtcctcgtggccg
gcccccaacaagagtctggtgggaaagcgaggcagtgccggggatctgggccggaggagg
agggacgacatggcccgggtctttgtggggttcgagtacgaggacagcaggggccgacgc
ttcatcagctccggccctgagaagatagtgaaggcgctggggcccgggggcgctaaagac
cccgccacacgggtgctgaacaccgacatgccgctttacgtcccggctccatcgcagggc
cgaggcctgaagccacacttcgctcagctggctcgacttttcatcgtggtgcctgacgcc
ccgctggagatcaccctccacccccaggtccagcctggcccccctccctgcccgatcttc
tacacagagcagtcagaggtcgtgttgccgcctgacggcttctgggttctgcgcttccct
tattcctacgcgacagaacgtggcccctgtttcccccccaaggagaaccagcccctcagc
aacttcaaggtgctgcgcggcatcctgagggccgccgccgccgccaacccgccgccrccg
tga
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