Austrofundulus limnaeus (annual killifish): 106530684
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Entry
106530684 CDS
T06063
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106530684
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106530684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
106530684
NCBI-ProteinID:
XP_013881808
UniProt:
A0A2I4CP88
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MYSLMDHELKPAGQNHQNSTGMSPITGANSHQKXACPPGTDPMDKVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLLTDSEKRPFIDEAKRLRAVHMKEYPDYKYKPRRK
TKPLMKKDPQVGKYPLSAAGNLAAGSPRMEAYSWASPGPYTGMQTEGLSYSQQLHRYELP
TLQYPSAMTGAQTYMTGANSYSPMSYSNSPQQLSPVTVSHSPSAGTPNHHRGALQGDLRD
MISMYIPGPGGDSSDPATAQRSYASVQQHYLTGTVPLTHI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgatggaccacgagctgaagcctgcgggacagaaccaccaaaactctacg
gggatgtcaccgatcaccggggccaactctcaccagaaakcagcctgcccgccgggaacc
gaccccatggacaaagtcaaaaggcccatgaacgcgttcatggtctggtcraggggtcag
agacggaagatggctcaggagaaccccaaaatgcacaactctgagatcagtaagcgactg
ggggctgagtggaaactgctgacggactcggagaagagacccttcattgatgaggccaag
aggctccgggcggtccacatgaaggagtacccggactacaagtacaaacctcggcggaag
accaaacccctgatgaagaaggacccccaggtgggcaagtatccgctgtcagcggccggg
aacctggcggccggcagccccaggatggaggcttacagctgggcctcccctggaccttac
accggcatgcagaccgagggactcagctacagccagcagctgcaccggtacgagctgccc
accctgcagtacccgtccgccatgacgggagcacagacctacatgaccggagccaactcc
tacagtccaatgtcgtacagcaacagtccacagcagctgagcccggtcaccgtgtcccac
tccccctcagcagggacgccaaaccaccaccgaggagctctgcagggggatctcagggac
atgatcagcatgtacattcctggaccaggaggggattcctctgaccctgcaactgcacag
aggagctacgccagtgtccagcagcactacctcactggaaccgtcccactcacacacatc
tag
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