Austrofundulus limnaeus (annual killifish): 106530739
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Entry
106530739 CDS
T06063
Symbol
cpsf7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03015
mRNA surveillance pathway
alim03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106530739 (cpsf7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106530739 (cpsf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530739 (cpsf7)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106530739 (cpsf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
106530739
NCBI-ProteinID:
XP_013881885
UniProt:
A0A2I4CPF3
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAAARPAAGPSSSIDHMYDDLYANNDEDLEKIAEANELFDAVLTGTVDREKETAXKGLSS
KDGSAKEKEKSADAIKEKAEKSQRKLSLYIGSFPWWTSDEEIICIAQRLSVKDITEIKFA
ENKVNGQSRGYAKVDVKSKESLKVLLEKIPQCHINGELLDCRFATVENLNMFEEIANKRM
PLRAPSESNETNSTEKVPTPPSKESNPPPIPSLFPPHPLPNSFPPAPNPFLIHPPPLFPT
MPPVIPPLMPPHMFPPPPVQVPGHPPPNLHMNPAFFSPTPDGHSSKSYMQQTKPTQNKNG
DFEELMSRNRTIASNAITKAVSGATTGDTRMAMETLLTAIAIIKQSRVYGDDRCQALVTS
LEDCLISIKGNESYERRSRSRERDRDRSRDRDYERNRERDRAYERDRERDRDHERNRDHE
RDRERPRERYRDDFHDRESAAKSRRHREHSWKGDGDKERSREQERYRDHRDRHR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcacgacctgcagccggaccgagttcctcaattgaccacatgtacgacgac
ctttatgcaaacaatgacgaggatttggagaaaatcgctgaagcaaatgaactgtttgat
gctgttctcactggtacggttgatcgagagaaggagacggccargaaaggactttcctcc
aaagatggttcagctaaagagaaggagaaatcagctgatgccataaaagagaaagcagaa
aagtctcagaggaaattgtctttatatattggaagtttcccctggtggacatctgatgaa
gagattatctgcattgcccaaagattgagcgtgaaggacatcacagaaatcaaatttgct
gagaataaagttaatggccagtccagaggctatgcaaaagtggacgtaaaatcaaaggag
tcacttaaagtcttattggaaaaaataccacaatgtcacataaatggggaattgttagac
tgtcgatttgccactgttgagaacctcaatatgtttgaggaaattgccaataaacgtatg
cctttacgtgcaccatccgaatccaacgaaacaaattctacagaaaaggttcccacgcca
ccgtcaaaggaatccaatcctcctcctatcccttcccttttcccaccacatccacttcca
aacagctttcctcccgctcccaacccctttcttattcatccacctccactgttcccaact
atgccaccagtaatccctcccctcatgccaccacacatgtttcctccacctcctgtccaa
gtacctggccatccgcctcccaatcttcacatgaatcctgctttcttcagccccactcca
gatgggcacagcagcaaatcatacatgcagcaaacaaaaccaactcaaaataaaaatgga
gattttgaggaactgatgagcagaaacagaactattgccagcaatgcaatcaccaaggct
gtgtctggggctacaactggtgacactcgtatggccatggaaacattattaacagccatt
gccatcattaagcagtccagagtgtatggagatgatcgctgccaagctctagtcacctca
ctggaagactgtttaatttcaatcaagggcaacgaaagctatgagagacgcagccgttcc
agagaaagagaccgggacagaagtcgggatagagactacgagcgcaacagagagcgtgac
cgagcctacgagcgcgacagagagcgcgacagagaccacgagcgcaacagagaccacgag
cgagacagagagcgaccgagagaacgttacagggacgactttcacgaccgggagagtgca
gcaaagtctcgaagacacagagaacattcctggaagggagacggagacaaggagcgctcg
cgagaacaagagagatacagagatcacagagaccgacaccgctaa
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