Austrofundulus limnaeus (annual killifish): 106530742
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Entry
106530742 CDS
T06063
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106530742 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530742 (hspd1)
03110 Chaperones and folding catalysts [BR:
alim03110
]
106530742 (hspd1)
03029 Mitochondrial biogenesis [BR:
alim03029
]
106530742 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106530742 (hspd1)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106530742 (hspd1)
Messenger RNA biogenesis [BR:
alim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106530742 (hspd1)
Chaperones and folding catalysts [BR:
alim03110
]
Heat shock proteins
HSP60 / Chaperonin
106530742 (hspd1)
Mitochondrial biogenesis [BR:
alim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106530742 (hspd1)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106530742 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
106530742 (hspd1)
Exosomal proteins of breast cancer cells
106530742 (hspd1)
Exosomal proteins of colorectal cancer cells
106530742 (hspd1)
Exosomal proteins of bladder cancer cells
106530742 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
106530742
NCBI-ProteinID:
XP_013881886
UniProt:
A0A2I4CPI1
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MFRLPSIMKQVRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIELKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMMAVETVISELKKLSKPVTTPEEIAQVATISANGDV
DIGNIISNAMKKVGRKGVITVKDGKTLQDELEVIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGNPADLEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPSLDTIKTANTDQKIGVDIIRRSLRIPAMTIA
KNAGVEGSLVVEKILQGPPEIGYDAMQGEFVNLVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttacccagcatcatgaagcaggtgaggcctgtgagccgagcgctggctcct
cacctcacaagagcctacgctaaggatgtaaagtttggggctgacgctcgagccctcatg
ctgcagggagtggacctgytggcggatgctgtggctgtcactatgggcccaaagggacgc
acagtgatcatcgagcagagctggggcagccccaaggtcacaaaagatggagtgacggtg
gccaaaagcatcgaactgaaggaccgctacaagaacatcggcgccaagctggtgcaggac
gtggcgaacaacaccaacgaagaagccggcgacggcacaaccaccgccacggtgctggcc
cgcgccatcgccaaggaaggcttcgacaacatcagcaaaggtgcgaaccccgtggagata
cgccgcggcgtcatgatggctgtggaaacggtcatcagcgagctgaagaagctctcgaag
cccgtcacgaccccagaggagattgcgcaggttgctacgatctcagccaatggagatgta
gacatcggtaacatcatatccaatgccatgaagaaagttggccgcaaaggagtcatcact
gtcaaggatgggaagactttacaagacgagcttgaggtgattgaaggcatgaagttcgac
cgtggttacatttcaccgtacttcatcaacactgcaaaaggtcagaagtgtgagttccag
gatgcgtatgtgttgctgagtgagaagaagatctccagtgttcagagcatcgtgccggct
ctggaactcgccaaccagcaccgcaaaccgctcgttattgtagctgaggatgtggacgga
gaagccctgagcaccctggttcttaacaggctgaaagtcgggcttcaggtggtcgctgtc
aaagctccaggcttcggtgacaaccggaagaatcagctgaaagacatggccatcgccact
ggtggcacggtgttcggggatgaagctctgggtctggctctcgaggacattcaggctcac
gattttggcaaagtcggtgaggtgcaaatcaccaaagatgacaccctgctgctgaaagga
ggtggcaaccctgctgacctggagaaacgagcagcagagattgcggaacagctggagaac
accaccagcgactacgagaaggagaaactcaacgagaggctggccaagctgtcrgacggc
gtcgctgtgctgaaggttggaggaacaagtgatgtcgaggtgaacgagaagaaggaccgt
gtgacggacgccctgaacgccacgcgagcagctgtggaagagggcattgtgcttggagga
ggctgtgctctgctgcgctgcatcccctcgctcgacaccatcaaaactgccaacactgac
cagaaaatcggtgtggacatcatcagacgatcactccgtattcctgccatgactattgcg
aagaacgccggcgtggagggctctctggtagtggagaagatcctgcaggggccacctgag
atcggctacgatgccatgcagggagagttcgttaacctggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcactcttggatgctgcaggagtcgcatctttgctgtcc
actgcagaggctgtggtcactgagatacccaaggaggagaaggagatgccaggaggaatg
ggcggcatgggaggaatgggtggaatgggaggcggcatgggtttctga
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