Austrofundulus limnaeus (annual killifish): 106530772
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Entry
106530772 CDS
T06063
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106530772 (taf1b)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106530772 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Motif
Other DBs
NCBI-GeneID:
106530772
NCBI-ProteinID:
XP_013881925
UniProt:
A0A2I4CPJ7
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MDEEHTAGYREPCAQCAEVNWGISDEGRFYCRSCHNVIERTREAEVLTFQQGTSRVTTIK
KGPRTKKEGTGYTWTVCEGFQFILTMQADALLRLGLSPRFKDEVLCQLWRLFLQKSQQAY
CQNQATNFKFGPKGMESDSDSAAESITWTTDGESNPPSTAGSDAEIFSDWTSSEGFTDPV
APRRRCRNPMSMRKTLALIHLALMWSHEELTLSDLLRLVKEGFVPYVNAFEHLPEEMKLF
GSEALIFSTESIPSYSSVHKEAQDLVLFLDLPAPPPVSPQSLLHPTRLSLRYLMDANLPD
DLHRWVCQLLERVGVADKTSRPVLPRYDLQTAAAIIVTMKLMVGLNDRTEWDLSNAVGHQ
DSSEDLFSFRRWFRLVQTALSRAQQNRDQDLSRKQWKPKNPIIVSRKDKSRSLKRKRVSE
QLQATFERVSSCPAGVQDVAPSSFRFCWGDEDGSDGPSLHHMKLDQVLTQKGQVLTHLNG
SYWHTLLQPCRLRRCSARRRFLELQPTLPRSFGWLLLLFSFLLDVEPWSLFKEVLKVESQ
LLDSPPDRTHSGRREGSTKRPKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacacacggcgggatacagggagccctgcgcacagtgtgcggaggtgaac
tggggcatctcagatgagggtcggttctactgcaggtcctgccacaacgtcattgagaga
accagagaggcggaggtcctgaccttccagcaggggaccagtagagtcacgaccatcaag
aaaggtccgagaaccaagaaggaagggaccggctacacctggaccgtctgcgagggtttc
cagttcatcctgacgatgcaggccgacgctctgctcagactgggactcagtccccgtttt
aaggacgaggttctgtgtcagctgtggagactgttcctgcagaagagccagcaggcgtac
tgccagaaccaggccaccaacttcaagtttggaccgaagggcatggagtcggattcagac
agcgccgctgagtccatcacctggactactgacggagagtcgaacccgcccagcaccgcc
ggttctgatgcagagatcttcagtgattggacgagctcggagggcttcaccgacccggtg
gctccgcggaggaggtgccgcaacccgatgagcatgaggaagactctggccctgatccac
ctggctctgatgtggagccacgaggagctgacgctcagcgacctgctcaggctggtgaag
gaggggtttgttccgtatgtgaacgccttcgaacatcttcctgaagagatgaagctgttt
ggatcagaagctctgatcttcagcactgagtccatcccgtcctacagctcggtccataag
gaggcccaggacctggttctgttcctggatcttcctgctcctcctccagtcagcccacag
tccctgctgcacccgacccggctcagcctgcgctacctgatggacgccaacctccccgac
gacctgcacaggtgggtctgccagctgctggagcgagtgggcgtggccgacaagacgtcg
cgtcctgtcctgccgcggtacgacctgcagaccgccgccgccatcatcgtcaccatgaag
ctgatggtcggcctgaacgaccgcaccgagtgggatttatcaaacgcagtgggacatcag
gactcctcagaggacctgttcagcttcaggaggtggttcagactggtccagaccgctctg
agccgggctcagcagaaccgggaccaggacctcagcaggaaacagtggaaaccaaagaat
cccatcatcgtcagcaggaaggataagagtcggtccctgaagaggaaacgcgtctcggag
cagctgcaggccacctttgagagggtgtcctcctgtccagcaggcgtccaggacgtcgct
ccgtccagcttcaggttctgctggggggacgaggacggatcagatggtcccagtctgcac
cacatgaagctggaccaggtcctgacccagaaaggacaagtcctgacccacttaaacggc
tcgtactggcacaccttgctccagccctgccgcctccggcgatgttcggctcgccgccgt
ttcctggagctgcagccgacgctgccgcgctccttcggctggctgctgctcctcttctcc
ttcctgctggacgtggagccgtggagtttgttcaaggaggtgctgaaggtggagagccag
ctgctggactcgcctccggacagaacgcactccgggaggagggaggggtcgaccaaaagg
ccgaagaagtga
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