Austrofundulus limnaeus (annual killifish): 106530785
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Entry
106530785 CDS
T06063
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106530785
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106530785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Radial_spoke
HSA
Motif
Other DBs
NCBI-GeneID:
106530785
NCBI-ProteinID:
XP_013881944
UniProt:
A0A2I4CPN7
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPSAAVGNSAVPSVVPDLGNGSHSETMKQFLGVIDKKVRNMEKKKSKLDDIQARKTKGER
LNQDQLEALSKYQEINNNLDFARELQKSFLALGQEVQKAVKKSARREQLQREETEQRRLR
TVLELQYLLDQLGDDGVRQDLKRLDVSGSPLLTDGDLASFDEFYKLVGPDRNYDLRLTEQ
YEDASLHLWALLEGRDKAVAGTTYKWLKDKLDKLMVSGYFDRADTNQNGACESEETQEEP
AVVTEAAATVEPPSEPEGLPNESCTEAVKVESTEFVNRQFVPETTYSTSDKDQMDEWTVE
AQMNSLQHHSPAQLAPEPNLTVNQVAPSPATDPVVRKQAVQDLMAQMQGTYNFMQDSMLE
FDGQALDPAIVSAQPMKPLQTVDLQQMGGPSTVHSESRLSQTPTISGPQDSSQASLSMSP
EQSTVPCSLSAAFPPVSKPTHSGGINVNAAPFQSVQAVFNMNAPVPPPTDSQPDPLKQSS
QFPGGYGQSFNSQSENTVEQPEIPQERLQSVVGGFQPQDQVMPSAGGHEDSSAAAGFGQS
SQSFYTSRAAPRGGPRNARGVVNGYRASSNGFRGGYEGYRPSFSNAPPTSGYGQTQFNTS
RDYSNSTYQREGYQQGYKRGTGQGSRGLSRGNAQAMRS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcagctgttggcaacagtgctgtcccgtctgtcgtaccagacctgggaaat
ggaagtcactcagagaccatgaagcagtttcttggtgttattgacaagaaggttcgaaac
atggaaaagaagaagtccaaactggatgatattcaagcaagaaagactaaaggggaaagg
ctaaatcaagatcagttggaggccttgtcaaaatatcaagaaatcaacaacaaccttgat
tttgctcgagagttgcagaagagcttcttggcgttgggtcaagaggttcagaaagcagtg
aagaagtctgcgcgaagagagcagctgcaacgggaggagacggagcagcggcgactgagg
accgttttggagctgcagtatttactggaccagttaggagacgatggtgtcaggcaggac
ctgaaacgactcgatgtctcaggttcacctcttctcactgacggtgacctcgcatcattt
gatgagttttacaaattggtgggacctgataggaactacgatctcaggttgactgaacag
tacgaagacgcctcgctacacttgtgggctctgcttgaaggccgagacaaggctgtggca
ggaaccacatacaagtggctgaaggacaaactggacaagctgatggtcagtggttacttt
gacagagcagacactaatcagaatggggcctgtgagtcagaggagacgcaagaggaacca
gctgtggtgactgaggctgcagcgaccgtggagccgccatcagaaccagagggacttcct
aatgaaagctgcacagaggctgttaaagtggaatcwacagagtttgttaacagacagttt
gttccagaaactacatacagcacttcagacaaagaccaaatggatgagtggactgtggag
gctcagatgaattccctgcagcaccactctcctgcacagctagctcctgagccaaacctt
actgtgaaccaagtcgctccctctcctgccactgaccccgtggtcaggaaacaggcggta
caagacctcatggcccagatgcaggggacatacaactttatgcaggactccatgttggaa
tttgacggccaggctctggacccagccatcgtttctgcccaaccaatgaagcccctgcag
accgttgacctgcaacagatgggtggcccctcaacagttcactcagagtccaggctttct
caaacacctacaatatccggaccacaagactcgtctcaagcctccctttctatgtcacct
gaacagtcgactgtcccgtgttccttgtctgctgccttcccacctgtctctaaacccacc
cactctggaggcatcaacgtgaacgcagcgcctttccagtcagtgcaagcggtattcaat
atgaatgcacctgtacctcctcccactgacagccaaccagacccattgaagcagtccagc
caatttccaggtggctacggtcagagctttaacagccagtcagagaatacggtagagcag
cctgaaattccacaggaaagactacagtcagttgttggtgggttccagccccaagaccaa
gtcatgccttcagctggaggacatgaggactcctctgcagctgcagggtttggacagtcc
agccagtctttttacacaagcagggccgcacccagaggtggacccaggaatgctcgtgga
gtggtgaatggatatcgggcctcttcaaatggattcagagggggatatgaaggttatcgt
ccctccttttcaaatgctcctcccaccagcggatatggccaaacccagtttaacacatct
cgggattattccaatagtacataccagagggagggataccagcagggctacaaacgagga
actggtcaaggatctcgaggtttgtcgcggggcaatgctcaagcaatgcgatcttaa
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