Austrofundulus limnaeus (annual killifish): 106531015
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Entry
106531015 CDS
T06063
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106531015 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106531015 (nup160)
03036 Chromosome and associated proteins [BR:
alim03036
]
106531015 (nup160)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106531015 (nup160)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106531015 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
DUF2252
Motif
Other DBs
NCBI-GeneID:
106531015
NCBI-ProteinID:
XP_013882221
UniProt:
A0A2I4CQG2
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MRTQAKFESAARAAAPVTWFRGEDGGGVRTELRGVLRVRAGSGAAIPRDYCVSAPPGGLK
YADSAGAFHYEESGKLLSVTSNRFIHWSTSADSVQLVEQSLDTNLLNNSVRLKFSRCSVL
PGGVSIHETLNNIIILICTNQSVHRLVLPHPARMYRSELVTERHMQSIFTDVMKLDLQDP
AHYSVLTSWAGHTASPGAATAWISFHGDAHFALASPAGGITVVTLPPHGTQGGVSVVELK
RSSVMRRISGWMPTAIRGDQSPADLVLSLAVRELEEDSFIFALGQNHRLRMWSLTDHTCL
LEADMLEYMPVCKGVRRLSGQGHRLRLTFSSRTGLCLCVYLAVPQRGQFIILQLVGTDNN
RYSLEHISSLFNTQETLVDFTLTPSDVWALWVDESGNTVVKYINFEHNTAGQWNQVFVQP
PPPEEVPVGMDLDPREMYLEVLFSPLRFTASAIVKALQIFHRGSETVSDLSWENLKKEVT
QAVESELRSSVTEFEFSQEEYRQLQVEFWSRFYSCCLQYQEVESSPLGLTVSPYTGMVCL
LRKGFVSFLLPCFAVDHLYLSCDEYLLYEEETPVADAPDVARDVLQLVQSLRLVSDAVSA
EMAYEMERALEYLQTPERAAQLVLEDLLCNDTDNVIVDIQNKLQDVRNPAAAMMVLLREM
DLETDSDLGVDGPVVADLSVRMNLSRLYSSSCAVSTICQAVCHTAMTRARFCRDLLILQK
LYLRFGDNVFLGGGAQLLQVQQDLIPRTSHLLSSYHLLKHVSQSLASSIPMDTIDVNLQH
LTALELSDTPSVTSGRSALNPQTVVELFYQTVGRRIITSQMFSQQPCDSLLLWTQLTSNM
VHLLAQLLWPSNPGFQFPECLMANCQFSQLQEYVRLIGPWCQVNIGSCRFVLAQSYLANG
ESQKALQCFQEAASEVEREEFLMKLTAGEDEEAASSPRLQYYNKVLRLLEDVGLPELVIQ
LASLAITEAAGDAHSQAALWTRVFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVL
CERSQLQDLVQFPYVNLHDEVVSIIESRARGLDLLTHNYYELLYAFHIGRHNYRKAGTIM
FEFGMRLGREVRTRLGLQKQVNCYLAALNCLRLIRPEYAWIVQPASGSTYERPGASPKRN
ADGEFSAEPAAGRRQVDILELTDLEKEYFLSRARLTLAQHHPPSAAIAGSASAPELVLLL
VQTGLFDSALSLSRTFKLDLSPVFDALTFKCIQMQFGGEESQNEAWSWLAANQLSVVNTK
ESSATDEAWRLLASYLDRYPSTNGQHHRHVIHKLLSHGVPLPDWLLQSYKRVDAPSLLRL
LLNFDHLEAAAELVLEYVDAVLGRGHQYFGIERPLSATSPPAWLPYTAIDQLLHALSETR
THINLHTKLQDKLDEYHGVVRQMSQRRLIAQRRVAAEIS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacacaagccaagtttgaaagcgcagcgcgcgcagctgcgccggtcacgtggttc
cgaggagaagatggcggcggtgttagaacggagcttcgtggagttctgcgggttcgagcg
ggaagcggagcggcgattccgagagattactgtgtgagtgctcctccaggtgggctgaag
tatgcagacagtgctggagcgtttcactatgaggagagcggcaagctgctgtcggttacc
agcaacagatttattcactggtcgacatcggctgactctgtgcagctggtggagcagtct
ctggacaccaacctcctgaataactctgttagactgaagttcagccgctgcagcgtcctg
ccaggaggagtcagcatccatgagaccctgaacaacatcatcatcctcatctgcaccaat
cagagcgtccacaggctggtgctgccacacccggcgcgaatgtaccgcagcgagctggtg
acagaacgccacatgcagtccatcttcacagacgtgatgaagctggacctgcaggacccg
gctcactactcagtcctcaccagctgggcggggcacacggccagtcccggcgccgccacg
gcctggatcagtttccacggagacgcccacttcgcgctggcctcgcccgccgggggcatc
accgtggtgacgctcccacctcacggcacccagggcggcgtgtcggtggtggagctgaag
aggagctcggtgatgaggaggatctccggctggatgcccacagccatccggggggatcag
agtccggctgacctggttctgagtctggcggtccgggagctggaggaagactccttcatc
ttcgctctgggtcagaaccacaggctgcgcatgtggtcgctcacggaccacacgtgtctc
ctggaggcggacatgttggagtacatgccggtgtgtaaaggtgtgaggcgtctgtcgggt
cagggtcaccgcctgaggctgaccttctcctccagaaccgggctctgcttgtgtgtttac
ctggcggtcccgcagaggggccagttcatcatcctgcagctggtcggaaccgacaacaac
cgctacagcctggagcacatctcctcactgttcaacacgcaggagactctggtggacttc
actctgaccccctccgatgtctgggccctgtgggtggacgagtccggcaacactgtggtc
aaatatatcaactttgagcacaacacggcgggccagtggaaccaggtctttgttcagcct
cctcctccagaagaagtccccgtagggatggacctggacccccgggagatgtacctggag
gttctgttctctcctctgaggttcacagcttcagccatcgttaaagctctacagatcttc
catcgtggttcagagacagtctcggatctgtcctgggagaacctgaagaaggaggtgact
caggcggtggagagtgagttgcggagcagcgtcacagagttcgagttctctcaggaggag
taccgtcagctgcaggtagagttctggtccaggttctactcgtgctgtcttcagtaccag
gaggtggagtcatctcctctgggtctgaccgtcagtccctacaccggcatggtctgcctg
ctccgcaagggcttcgtgtccttcctgctgccgtgttttgccgtggatcacctgtacctg
tcctgcgacgagtacctgctctacgaggaggagacgcccgtcgccgacgcccccgacgtg
gcccgagacgtcctgcagctggtccagagcctgcgcctggtcagcgacgccgtctctgca
gagatggcctacgagatggagagagctctggagtatcttcagacccccgagagagcggcc
cagctggttctggaggacctgctgtgcaacgacaccgataacgtcatcgtggacatccag
aacaagctgcaggacgtgcggaacccggcggcagccatgatggttctgctgagggagatg
gacctggagacggactctgatctgggtgtggacgggcccgtggtggcagacctgagcgtg
aggatgaatctgtcccggctgtacagcagcagctgcgccgtgtccaccatctgccaggct
gtgtgccacaccgccatgacccgggcccgtttctgcagagacctgctcatcctgcagaaa
ctctacctgcgcttcggagacaacgtgtttctgggaggcggggcccagctgctgcaggtc
cagcaggatctgatccctcggacctcccacctcctctcctcctatcacctcctcaaacac
gtcagtcaaagcctggcgtcctccatccccatggacaccattgacgtcaacctgcagcac
ctcacagcgttggagctgtcggacacaccgagcgtcacctcaggtagatcagctctgaac
cctcagacggtggtggagctcttctatcagacggtcggcaggaggatcatcacctcgcag
atgttttcccagcagccgtgtgactctctgctcctctggactcagctgacctccaacatg
gtccacctgctcgctcagctgctatggcccagtaatcctggtttccagttccccgagtgc
ctgatggccaactgtcagttcagccagctgcaggagtacgtgcgtctgattggcccgtgg
tgccaggtgaacattggctcgtgtcgcttcgtcttggctcagtcctacctggccaacggt
gagagtcagaaggccctgcagtgtttccaggaggcggcgtccgaggtggagagggaggag
tttttgatgaagctgacggccggcgaggatgaagaggcggcgtccagccccaggttacag
tactacaacaaggttttgcggctgctggaggacgttggtctgcctgaactcgtcatccag
ctcgcctctctggccatcacagaggccgctggcgatgcccacagtcaggcggctctgtgg
acccgggtcttcaaacatcatctggacttgggacacaacagtgaggcttatgaagctctg
acccagaatcctgacagcagcatgcagctggattgtctccgtcagctggtggtggttctg
tgtgaacgctctcagctgcaggacttggtccagttcccctacgtgaacctgcacgatgag
gtggtcagcatcatcgagtctcgtgctcgcggtctggacctgctgacccacaactactac
gagctgctgtacgccttccacattggccgacacaactacaggaaagccgggaccatcatg
tttgagttcgggatgcgtctgggtcgggaggttcggactcgcctcggcctccagaaacag
gtgaactgttacctggctgccctcaactgtctgcgcctcatcagaccggagtacgcctgg
atcgtgcagccggcgtctgggagcacgtacgagcgtccaggagcgtcaccaaagaggaac
gctgacggagagttttctgctgaaccagctgcaggtagacgtcaggtggacatcctggaa
ctgactgacctggagaaggagtacttcctgtcccgcgctcgcctcacactcgctcagcac
caccccccgtctgcagccatcgcaggaagtgcgtctgctccagaactggtcctcctcctg
gtccaaacaggactctttgactcagcactgtctctgagtcggacctttaaactggacctg
agtccagtctttgacgctctgaccttcaagtgcatccagatgcagtttgggggggaggag
tctcagaacgaagcttggagctggttggctgccaatcagctgtctgtcgttaacacaaag
gagtccagcgccactgatgaggcgtggcgcctgctggcctcctacctggacaggtatcct
tccaccaacgggcagcatcatcgccacgtcatccacaagctgctgtcacatggagtgccg
ctgcctgattggctgctgcagtcctataagcgtgttgatgctccgtcgctgctgcgcctc
ctcctgaactttgaccacctggaggcggcggccgagctcgtgctggagtacgtggacgcc
gtccttggccgaggacaccagtactttggaatagagaggccgctgtcggccacgtctccg
cccgcctggctgccgtacaccgccatcgatcagctgctgcacgctctgagcgagacgcgg
acgcacatcaatcttcacaccaaactccaggacaaactagacgagtatcacggcgtcgtg
cgacagatgagccaacggcgtctcatcgctcagagacgagtcgctgctgagatcagctga
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integrated database retrieval system
