Austrofundulus limnaeus (annual killifish): 106531020
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Entry
106531020 CDS
T06063
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106531020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106531020
03036 Chromosome and associated proteins [BR:
alim03036
]
106531020
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106531020
Coactivators
SAGA/TFTC/STAGA complex
106531020
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106531020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Ank
Motif
Other DBs
NCBI-GeneID:
106531020
NCBI-ProteinID:
XP_013882228
UniProt:
A0A2I4CQH4
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MLKSDLHNGVTVKMAGASDPLEDVLSDEVDQKAVSDLVGSLESQLGDRKTPAASYSDGKR
DPAAAAAGHLSGKVRDQVGSAEPPQQGHPKAGSTQEPGVNDPLSGQSLPSSASSGPTGTV
RTVGTSLQAAGASALTAPPGPGPVTLSTQPPASFHRAAVLCPSAAPSSAEATRTSSPGSQ
GLNGSTGAGVPPPPSGVSSVISAGGSAVVGSMASQPGSPAVTLPGHPSPVPGAQNGLEPK
AVPSPSASAPQVLNHSTPLMHAKMLVTGQTPAGTPVILTSTPPPPAAQSSIIQTQTGTSP
GAKPVINGVAQPTVAVVRPPGAPVGGPTSIQQQSPGLVAGTTRAPTPQPGLTVRPQQQTT
IQLPPGFTIPPGMVLVRTETGQLVMVSPQVLAQAQAKIQQGQTAVTQRPAAPIGTPTIRV
STATTAPAGPPTPRLASAPPTRIVQSPSTSSVQALTGAVSIRMATPQKTSTVITAGGNAK
PAVVPPSPLPNTATPTPPTATPITRVTVVSQEMQENVKKCKNFLATLIKLASHNSPFPET
SKNVKALVQDLLDAKIEPEEFTSRLQAELKSSPQPYLIPFLKKSLPALRQTLLNSQQSLM
TAPPSTSAPPPAAPGSVTAAATIRPPPPGNTVGGAVRLNPPIANTTAVAVCRPGVQSVQT
HSPVVINQTLRHPATFIRGPATIAGKTPLHLAAQANQKKLSDPGGGTFRDDDDINDVASM
AGVNLSEENARILATSSELVGTKIRSCKDESFLPPGLLHRRILDTAKKQGVTEVPLDVVN
LVSHATESRLRSLLEKVTVIAQHRSEGGKDEEHYEQTTDVRSQLRFFEQLERLEKQRKDE
QEREILLKAAKSRARQEDPEQIRLKQKAKERHQQEQAEIRQRDANLTALAAIGPRKKRKL
ESGGGGEVASGSGVGSSVSSSPRQQQLRQRITRVNLRDFIFCLEQDRSTTRSLTLYKALL
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaagcgatttgcacaacggtgtaacagtaaagatggcgggagcctccgacccg
ctggaggacgtgctctccgacgaggtggaccagaaagcggttagcgacctggtcggctcc
ctggagtcccagctaggcgacagaaagactcccgcggcctcttattccgacgggaagcgg
gacccagcggcggccgctgcgggacacctctcaggaaaagtgcgagatcaagtggggtcc
gcggagccgccgcaacaagggcatccaaaagcggggtcgacccaggagcccggcgtcaac
gacccgctgtccggccagtctctcccctcctcggcctcttcaggacccaccgggaccgta
agaaccgtcggaaccagtctgcaggcggcgggagcctctgctctgaccgctccgcctgga
ccgggacccgtaactttgagcactcagccccccgctagcttccaccgggcggccgtcctg
tgtccgagcgcggctcccagctccgcggaggcgacccggacctcctctcctggatcccag
ggcttgaacggcagcaccggagccggtgtccccccgccgcccagcggggtcagctccgtc
atcagcgccgggggctccgctgtggtcgggtccatggcttcacagcccggatcccccgct
gtgaccctgccgggtcaccccagcccggtgcccggcgcccagaacgggctggagcccaaa
gcggtcccctccccgtccgcctcagcccctcaggtcctgaaccacagcacccctctgatg
cacgccaagatgctggtgaccgggcagacccccgccgggacccccgtcatcctgaccagc
accccccctcctcctgcagcccagtcctccatcatccagacccagactgggaccagcccc
ggggccaagcccgtcatcaacggggtggctcagcccaccgtggccgtggtcagaccacct
ggtgcccctgtcgggggtcccacctccatccagcagcagagtcccgggctggtggccggt
acgacccgggcacccaccccccaacccgggctgacggtccggccccagcagcagaccacc
atccagctgccccctggcttcaccattcctccaggtatggttctggtccggacagaaacg
ggtcagctggtcatggtctctccacaggttctggctcaggctcaggccaagatccagcag
ggccaaacggcggtcacacaaagacccgcggcgccgatcggcacacccaccatccgggtc
agcaccgccaccacggcgcctgcaggccccccaaccccccgcctggcctcggcccctccc
accaggatcgttcagtccccctccacctcctccgtacaggcgctgaccggcgccgtgtcc
atcaggatggccacgcctcagaaaacctccacggtgataacggccggcgggaatgccaaa
cccgccgtcgtgccgccgagcccgctccccaacacggccacgcccacccctcccacggcc
acgcccatcaccagagtcacggtggtgtcgcaggaaatgcaggaaaacgtgaagaaatgt
aaaaactttctggccacgctcatcaagctggcgtcccacaactccccgtttccagagacc
tccaagaatgtgaaggccctggtccaggacctgctcgatgcaaagattgagcctgaggag
tttacgtctcggctgcaggctgagctgaagtcctccccacagccctacctcatccccttc
ctgaagaaaagcctccccgctctgcgtcagacgctcctcaacagtcagcagtccctgatg
acggctccgcccagcacctctgccccgcctccagctgctcccggctcggtcaccgccgcc
gccaccatcaggccgccgccgcccggcaacaccgtgggcggcgccgtccgcctgaacccg
cccatcgccaacacaacagctgtggcggtgtgcagaccaggagtccagtctgtacaaacc
cactcacctgttgtcatcaaccagaccctcagacatccagctacgttcatccgaggacct
gcaaccatagccggcaaaactcctctccacctggcagctcaagccaatcaaaagaaactg
agtgacccagggggcgggaccttcagggacgatgatgacatcaacgacgtggcgtcgatg
gccggcgtcaacctgagcgaggaaaacgctcgtatcctagcaaccagctcggagctggtc
ggcaccaagatccgatcctgcaaagacgagtccttcctgcccccgggcctcctgcaccgg
cgcatcctggacacggccaagaagcagggagtgacggaggtcccgctggacgtggtgaac
ctggtctcacacgccaccgagtcccggctgcgctcgctgctggagaaggtcacagtcatc
gctcagcaccgctcagagggcggcaaggatgaagagcactacgagcagacgactgatgtt
cgatctcagctcagattctttgagcagctcgagcggctggagaagcagaggaaagacgag
caggagcgagagatcctgctgaaggccgccaagagccgggcccggcaggaggatccagaa
cagatccggctcaagcagaaagcaaaagagcggcaccagcaggaacaggcggagatccga
cagcgggacgccaacctcacggctctcgctgcaatcgggccacgcaagaaacgcaaactg
gagtccggaggcggcggcgaggtggcctcgggctcaggtgtgggttcctcggtgagctcc
tccccccggcagcagcagctccggcagcggatcacacgagtcaacctcagggacttcatc
ttctgtctggagcaggaccgcagcacgacccggtccctgacgctctacaaggccctgctg
aagtga
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