Austrofundulus limnaeus (annual killifish): 106531245
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Entry
106531245 CDS
T06063
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106531245 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106531245 (ctdp1)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106531245 (ctdp1)
Protein phosphatases and associated proteins [BR:
alim01009
]
HAD phosphatases
Fcp/Scp phosphatases
106531245 (ctdp1)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106531245 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
106531245
NCBI-ProteinID:
XP_013882497
UniProt:
A0A2I4CR83
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MEGPPADSGGGAAAEGPAVQVSDMRLPTGALPLRLLEWRVKPGSLVNVDSVLALCAPVAQ
EKVTEAVKLPERKVKSDRAGVVKELGCQVGQIILPGSVIVKIEECSHPIVMKGLCAECGQ
DLTQLQGTNGNQQAPISTATVSMVHSVPELMVSSEQAKQLAREDQQRLHRNKKLVLMVDL
DQTLIHTTEQHFQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFTFGS
RLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWK
FAPNLITVKKYNYFQGTGDINAPPGSQEAQMARKGGPLSRPPESTEQAGADEHSNGLRKK
AKDLSVSEKEDPVIPQSQVGTSNERTQSDPGQSHGSETGQKGSESGVESKETQVCDETKV
KEDNDNRTEVAQEGVNSSVLSREGNNLDFDLSSDSDNDSITEKPPSSDSGSEGRSFQTKE
SGPEKEGQEPTDEDGTKEKDSKVSCEVENSCDVSQPSGVVLSDPELGNGCLDRREPETES
QNSEQSGVTVGGELLDQSMEDEEEEDEADTDRDDHLIYLEEVLERIHTEYFARYETYLRK
ETSEMPDIRRIVPELKSKTLEGTTLMFSGLYPTNYPKERTREYYHAKALGAKIGKNLILN
LQDPNRTTHLIAARAGTEKVRQAQGCKLLHVVNPDWLWSCLERWERVEEKLYPLKDDYSK
TSRSNSPAAFLDNQGSMQNPIFHQAPLHPKPPPAAPEVRTYDPVTGKLIRRGPQVSCPQP
YLQRSLSDPRDQSALRGTAQSQQNEVAGSSRADEQPGPSRRKRQLSMSETMPLYTLCRED
LESMDKEVDDILDEESDNESEGQGKERTNAKVMDDAEESQTGGGQTSGRELGPQASGVEE
RLQTSSSDNNLSQNVQRGHKRKQEEEGEEEDMAGHDAKKKRGDDSAESSKDSNEEEGSSS
EADEMAAALEAELIDFM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcctcctgctgattctggtggtggtgcagctgcggagggccccgcggtgcag
gtgtccgatatgcgcttgccgaccggggctcttcctctccggctcctagagtggagagtc
aaaccggggtctcttgttaacgtggactccgtgctggcgctgtgtgctcccgtagctcag
gagaaggtgacggaggctgtcaagttgcccgagaggaaggtgaaatcggaccgtgctgga
gtagtcaaggagctaggctgccaggttggacaaatcattcttcctgggagcgtcattgtc
aaaatcgaagaatgcagccatcccattgtcatgaagggtttgtgcgcagagtgtggtcag
gacctgactcagctccaggggacaaatgggaaccagcaagctcccatctccacagcaaca
gtctccatggtgcacagtgtccctgaactgatggtcagctctgagcaagcaaaacagctg
gccagagaagaccagcagagactccaccggaacaaaaagttggtcctcatggtggatttg
gaccagacactaatccataccactgagcagcacttccagcgcatgtccaataagggcatt
tttcacttccagcttgggcgaggagagcccatgctccacactcggctacgccctcactgc
aaagaattcttggagaaaattgccaaactctatgagttgcacgtcttcacattcgggagt
cgtctgtacgcacacaccattgctggctttttagatcctgaaaagaagcttttctctcac
agaatcctttctagagatgaatgcatcgatccattctccaagacggggaatcttaggaat
cttttcccctgcggggattcaatggtctgtatcatcgacgaccgggaggacgtttggaag
tttgcaccaaacctcatcactgtgaagaaatacaactacttccagggcaccggagacatc
aacgctccaccaggatcacaggaagctcagatggcccggaaaggaggccctttaagtcga
ccaccagagagcacagaacaagcaggtgctgatgagcacagtaatggtctcaggaaaaaa
gcaaaggacctcagtgtttcagaaaaagaagatcccgtaatacctcagtctcaggtagga
acatcgaatgaaaggacacaaagtgacccaggacaaagtcatgggtcagaaactggtcag
aaaggatcagagtctggggtggaatcaaaggaaactcaggtgtgtgacgaaacaaaagtt
aaagaagataatgataacaggacagaagtagcacaggaaggtgtaaactcttctgtgctg
agccgtgagggcaataacttagattttgacctttctagtgacagtgacaatgactccatc
acagaaaaacctccctcatcagacagtggtagtgaaggcaggtctttccagacaaaggaa
tctggaccggaaaaagaaggacaagaacccaccgatgaggacgggacaaaggaaaaggac
agcaaagtttcttgtgaagtagaaaatagttgtgacgtttcacaaccttcaggtgtcgtc
ctctctgacccggagcttggaaatggatgtttggacaggagagaaccagaaaccgaatct
cagaatagtgaacaatctggagtcaccgtgggtggagagctgcttgatcagagcatggag
gacgaggaggaagaagacgaagccgacactgaccgggacgatcacctgatatacctggaa
gaagtgctggaaaggatccacactgagtactttgctcgttatgagacctacctgaggaag
gagacctctgagatgccggacattcgaaggattgttcctgagttgaagagcaagacgctg
gagggaacaactttaatgttcagcggtctttacccaactaactaccccaaggagaggact
cgagaatactaccacgccaaagcactgggggccaagattggcaagaatctgattctaaac
ctgcaagacccgaatcggacaacccatctcatcgcagcaagagcaggaacagagaaggtg
cgtcaggcacaaggctgcaaactccttcatgtcgtcaaccctgactggctgtggagttgt
ttggagcgctgggaaagggttgaagaaaagctgtaccctctgaaggatgattactccaag
acgtcacggagcaacagccccgctgcttttctggacaaccagggctccatgcagaatccc
attttccaccaagctccactccaccccaaacctccacctgcagcaccggaggttcggacg
tatgaccccgtgacgggaaagctcattcgcaggggccctcaggtgtcctgtccacaaccc
tacctgcagcggtccctctctgaccccagagatcagtctgctctaagaggaactgcacaa
agtcaacaaaacgaggtggcaggatccagccgagctgacgagcagccaggaccttcccga
cgaaaacgccagctgagcatgtccgaaaccatgcccctgtacacactttgcagggaagat
ctagaaagcatggataaagaggtggacgacatcttagacgaggagagcgacaatgaaagc
gaaggccaagggaaggagaggacgaatgccaaggtgatggacgacgcagaggagagtcag
acaggaggtggacaaacgtctgggagagagctcggtcctcaagcgagcggtgtggaggag
aggcttcagacgtcatctagtgacaacaatctgtcccaaaacgttcaaaggggtcacaaa
cgtaagcaagaggaggagggagaagaagaagacatggccggacacgatgcaaagaaaaaa
cgaggggacgactctgctgaatcctccaaggactccaacgaagaagaaggcagcagctcc
gaggcagacgagatggccgccgcgttggaggcggagctgatcgattttatgtga
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integrated database retrieval system
