Austrofundulus limnaeus (annual killifish): 106531286
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Entry
106531286 CDS
T06063
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106531286
04121 Ubiquitin system [BR:
alim04121
]
106531286
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
106531286
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106531286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
zf-C2H2_12
DBD_Tnp_Hermes
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
106531286
NCBI-ProteinID:
XP_013882555
UniProt:
A0A2I4CRD1
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MAEALRAPPTNLKADVWKYFGFKSHEGTNDLDKKNQQTVCKICYIEVKYCGNTTNLQDHL
TRHHPETQYASASMQMQLEKAFGCKLPTNSPRAQKITKALATYICKDIRPXSVVEDDGFR
DLVKILEPRYVLPTRKQLSEXTIPNMYADVKHGVATSLKSAARVALTCDCWTSRATESYL
TITAHYIDDEWNLMCCVLQTRAVVNSHTASNLRDLLYEAIGEWDLTDKEPAIVTDNAANI
VRAVEMMGLLHVGYFAHILNLASQAALKVQAVARLLSRVRRITSFFHRSTTASHKLKEKQ
KLLGLPLHKLVMDVVTRWNSSVEMLDRFLEQQPAISAALLTPEVRRNEKDLCTLTEADIT
VAEDVVKALQPLKAATLVMSEERSPTLSVIAPLHAQLLDQMTCTPHNSTVIKEVKTSAYD
NLNSRYVALKDKLYLSSALDPRFKALPFLSDAA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcgttgcgagcgccgccaacaaacttgaaggcagatgtctggaaatatttt
ggatttaaaagtcacgaaggcacaaacgacttggataagaagaaccagcaaacggtatgc
aagatttgttacattgaggtgaaatattgtggaaacacgacgaatctccaagaccattta
acgagacaccacccagaaacgcaatatgcttctgcctcgatgcaaatgcagcttgagaag
gcatttggatgcaagttacccacaaactccccgcgagcccagaaaataacraaagctctc
gctacgtacatctgcaaggacatacgaccttwtagcgtagttgaagacgacggtttccgc
gacctggtgaagattctggagccacgctatgttttacccacacgtaaacagttaagtgaa
gyaacaatcccaaacatgtatgcagatgtaaaacatggcgttgcaacatcacttaaatca
gcagcacgtgtcgcgctcacctgtgattgttggacatccagagcaacrgaatcatacctg
accattactgctcactacattgacgatgagtggaatctaatgtgctgtgtcctgcagact
agagcagttgtaaacagccacactgctagtaatttacgagatctattgtacgaagccata
ggggaatgggatctgacagacaaagaaccagccatcgtaacagacaatgctgcgaatatt
gtccgtgcagtggaaatgatgggcttgttgcacgtgggctattttgcacacattctcaat
ttagcttcacaagcagcactcaaagtccaagcagtggcacgcctgctcagtagagtgagg
cgcatcacatcgttttttcatcgtagcactacagcaagccacaagcttaaagagaagcaa
aagttactgggcctgcctctacataagctggtgatggacgtggtgactcgctggaacagc
tcagtggaaatgctggaccgtttcttagagcagcaaccagcaatctcagcagctctgctg
acacctgaagtacgcaggaatgaaaaggatctctgcaccctgacagaggctgacataaca
gttgcagaagatgttgtgaaagctctgcagccactgaaagcagccacactggtcatgtct
gaggaaagatccccaactctatcagtcattgcacctctgcacgcacagctgctggaccag
atgacctgcaccccccacaactccacagtgattaaagaagtcaaaacttctgcatatgac
aacttaaattcaaggtatgtggccctgaaggacaagctgtatttatcgtcagcattagat
cctcgcttcaaggctcttcctttcttgtctgatgctgcctga
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