Austrofundulus limnaeus (annual killifish): 106531336
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Entry
106531336 CDS
T06063
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
alim01100
Metabolic pathways
Module
alim_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106531336 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
alim01003
]
106531336 (chsy1)
Enzymes [BR:
alim01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
106531336 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
106531336 (chsy1)
Glycosyltransferases [BR:
alim01003
]
Glycan extension
O-Glycan
106531336 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
106531336
NCBI-ProteinID:
XP_013882630
UniProt:
A0A2I4CRK5
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MAGRSRRAWFSVLLGLVVGFTLASRLILPKASELKRAGQKRKANPAVCGLNGAPRKEHGG
PLWAPQVNGSPATEKPGSGRNNFLFVGVMTAQKYLKNRAVAAHRTWAQTIPGRVEFFSSE
GSDTSIPIPIIALKNVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKSEKLES
FLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGECL
QEMYTTHEDVEVGRCVRRFAKVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYILSRKIADLRHRTIQLHREIVQMGRYGAAEPSREDLQLGIPPSFM
RFHPQQREDVLDWDFLTGKYLFSSSDSQPPRRGIDSSQRQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRLNPLYGAEYVLDLLLLYKKHKGK
NT seq
1375 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcggagcagaagagcctggttcagtgttctgttgggtctggttgtcggcttc
accctggcttccagactcatcttacccaaagcctcggagctgaaacgagccggacagaaa
cggaaagctaaccccgcggtgtgcggactgaacggagctccgaggaaggagcacggcggg
cctttgtgggctccacaagtcaacggttccccggccaccgagaagccaggctccggccgc
aacaacttcctgttcgtcggtgtgatgacggcccagaagtacctgaagaaccgagccgtg
gcagcacacagaacatgggcacaaaccattccaggtcgtgtggagttcttctcgagcgag
ggctctgatacctccatacccattcctatcattgctctgaagaacgtagatgactcgtac
cctccgcagaagaagtccttcatgatgttaaagtacatgcatgaccactacctggacaag
tacgagtggttcatgagggctgatgacgacgtctacatcaagagcgagaagctggagagc
ttccttcgaagcctgaacagcagcgaggccatcttcctgggccagaccggaatgggggca
cgagatgagctcgggaaactggctctggagcccggggagaatttctgcatgggggggccg
ggtgtcatcatgagccgggaggtcctgaggagaatggtgccccacattggagagtgtctc
caggagatgtacaccactcatgaagacgtagaggtgggccggtgtgtgaggagattcgcc
aaggtccagtgtgtctggtcctatgagatgcagcagctcttttatgagaactatgaaccc
aacaagaagggctacatccgagatctgcacaacagtaagatccatcgggccatcaccctg
caccccaacaagaacccgccctaccagtaccgcctgcacagctacatcctgagccgcaag
atcgcagacctgcggcaccggaccatccagctgcacagagagatcgtccagatgggccgt
tacggtgcggccgagcccagccgagaggacctgcagctgggcatccctccttccttcatg
cggttccaccctcagcagagggaggacgtgctggactgggacttcctgacaggaaagtac
ctgttctcgtcctccgacagccagccgccgcgccgcggcatcgactcctcccagaggcag
gccctggatgacatcatcatgcaggtgatggagatgatcaacgccaacgccaagacgcgg
ggccgggtcatcgacttcaaggagatccagtacggctaccggaggctgaacccgctgtac
ggggccgagtacgtcctggacctgctgctgctctacaagaagcacaaaggaaaga
DBGET
integrated database retrieval system
