Austrofundulus limnaeus (annual killifish): 106531340
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Entry
106531340 CDS
T06063
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106531340 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106531340 (vps35)
Membrane trafficking [BR:
alim04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
106531340 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
106531340
NCBI-ProteinID:
XP_013882634
UniProt:
A0A2I4CRN1
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQVVLPGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPERVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNLLMVLQL
KHFPPLFEYFDFESRKSMSCYVLSNTLDCSTTMVSQDQVDTILSLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLFHSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQ
LAFRYKENSSQDDKWEKKCQKIFSFAHHTISALIKAELSELPLRLFLQGALAAGDIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSTCAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDSSLQVQ
LFIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacccagcagtcccctcaggatgagcaggagaagcttctggacgaagctgtt
caggctgttaaagttcagtccttccagatgaagagatgtctggacaagaacaagttgatg
gatgctttaaaacacgcctctaacatgctgggagagctgaggacctccatgctttctcct
aagagttactatgagctctacatggccatctctgatgagctgcactacctggaggtttac
ctgacggatgagtttgctaaaggaaggaaggtggcagatctgtatgagctggtccagtat
gctgggaacatcataccccgactctacctgctgatcaccgtgggcgtggtctacgtccgc
tcctttcctcagtctcgtaaggacatcctgaaggacctggtggagatgtgtcggggggtc
cagcaccccctcaggggtctgttcctcagaaactacctgctgcagtgcacccgtaacatc
ctgccagatgatggggagcagtcagaggggtccgaggagatgaccggggacatcaatgac
tccattgactttgtcctgctgaactttgctgaaatgaataaattatgggtccgaatgcag
catcagggtcacagcagggaccgagagaagcgggagaaagaacggcaggaacttcggatc
ctggtgggaaccaatctggtccgtctgagccagctggagggagtcaatgtggacaagtac
aaacaggtggttctccctggagtcttggagcaggtggtgaactgcagagactctctggct
caggagtatctcatggagtgcatcattcaggtgtttccagatgagttccacctccaaacc
ctgaatcctttcctgcgttcgtgtgcagagctgcatcaacacgtcaatgtgaagaacatc
atcatcgctctgattgacagactcgctctgttcgctcatcgagaagatggaccaggtatt
cctgctgagatcaaactgtttgacatcttctcccagcaggtggccacagtcattcagtcc
cgtcaggacatgccgtcagaggacgtggtttctctccaggtgtctctcattaacttggcc
atgaagtgttaccctgaacgggtggactatgtggacaaagtcctggagagcacagtggag
atatttaataaactcaatctggagcacatcgccaccagcagcgctgtgtccaaagaactg
acccggctcctgaagatccctgtggacacctacaacaacctgctgatggtcctgcagctc
aaacacttccctcctctctttgaatactttgactttgagtcccggaagagcatgagctgc
tacgtgctgagcaacacgctggactgcagcaccaccatggtgtcccaggaccaggtggac
accatcttgagcttggtgtccactctgatccaggaccagccagaccagccagcagatgat
cctgacccagaggactttgctgaggagcagagtcttgtgggtcgtttcatccacctgttt
cactctgaagatccagatcagcagtacctgattctgaacacggcccggaaacattttgga
gccggtgggaaccagaggatccgcttcaccctgcctcctctggtgtttgctgcctaccag
ctggccttcaggtacaaggagaactcctcacaggacgacaagtgggagaagaagtgtcag
aagatcttctcgtttgctcaccacaccatcagcgctctcatcaaggcggagctttctgag
ctgccgctgcgcctcttcctgcagggggcgctggctgcgggggacatcggctttgagaac
catgaaaccgtagcgtacgagttcatgtcccaggccttctctctgtacgaggatgagatc
agcgactccaaagcccagctggcagccatcacgctgatcatcggcacctttgagcgaatg
aaatgtttcagcgaggagaaccacgagcctttaaggactcagtgcgccctggctgcttcc
aagctgctgaagaaacccgaccagtgcagagccgtcagcacctgtgctcacctgttctgg
tccggcagaagcaccgacaagaacggagaagagatccgggacgggaagcgtgtcatggag
tgtttgaagaaagctctgaagatcgccaaccagtgcatggactcgtctctgcaggtccag
ctgttcatagagatcctgaacagatacatctgtttctacgagcgggagaacgacgctgtg
acggttcaggtgttgaaccagctgattcagaagatcagggaggatcttccaaacctggaa
gcaagtgaagaaacggagcagatcaacaaacatttccacaacaccctggagcacctccgc
ctgcagagagagtcccctgagtctgagggacccgcctacgagggtctggttctctga
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