Austrofundulus limnaeus (annual killifish): 106531447
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Entry
106531447 CDS
T06063
Name
(RefSeq) protein transport protein Sec24B-like
KO
K14007
protein transport protein SEC24
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106531447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106531447
Membrane trafficking [BR:
alim04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106531447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
zf-Sec23_Sec24
Sec23_helical
HpaB
Sen15
Motif
Other DBs
NCBI-GeneID:
106531447
NCBI-ProteinID:
XP_013882776
UniProt:
A0A2I4CS13
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MSAPXYTNHSNSAGYSQNSTPNAGAAPPRQNGPLQTYPPVYPPAGYYGAPPPRQNYPNIS
APGKAPVTSSASYYQNHQQRHVAPPSYGAGAPPQPYATVPSSAPPPSNAQYSQPQQQPPY
APPGSYYAQQSYLSSSAQLHHHHHHHHQPSLVSAPASVPGAPVYPVASYPSAPGSSQYGT
LSTSQTSTTPQAPPTQMGAPLHHYPAPPPTSALQPGYDVAAHAPLTAVNGKGSTAAVQTN
SHQHYDQSPAPYSYNSYSGATRGGGGADRPPSGTPNASVHSSPGHPSGLQYGYVANSGAS
SASAATSGPAGALSSSGSEDEEDDEEEEDEEAGGDTSSSSTGSASPVPNNYDSLEGGSFP
DSMPPSNDATNQGQPYGSYGYQNLQPTYQQGPTQHTDGPPSQNLYGQPGYQQYPQVGPQP
FPSLSQLSAALGGLSGVPELEVEALRPVNLLQERNLLPPRPSEGPEPNISPDLKKVNCSP
QTFRCTLTSIPQTQALLNKARLPLGLLLHPFRDLQQLPVITSNTIVRCRSCRTYINPFVT
FLDQRRWKCNLCYRVNDVPDEFMYNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQP
AVYLFVLDVSHNAVEAGYLRFFCQSLLENLEKIPGDTRTRVGFLTFDSTVHFYNLQEGLS
QPQMLVVSDIDDVFIPSHDSLMVNLKESHELVKELLTSLPAMFSQSRETHSALGPALQAA
FKLMSPTGGRVTVFQXQLPTLGAGKLQSREDPNQRSSTKSVQHLGPATDFYKKLALDCSG
QQIGVDLFLLSSQYADLASLACMSKYSAGSVFYYPSFHHAHNPAQLEKFQKDLERYLSRK
IGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLANVNPDSAFAVQMSIEDSLADSSLAC
FQAALLYTSSKGKRRIRVHTLCLPVVSQLSDVYAGADVQAVTCLLANMAIDRSVSSSLSD
ARDAVVNAVV
NT seq
2912 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgrgttacaccaaccacagcaactccgccggctacagccagaactcaaca
ccgaacgcaggagctgcgcctccccgtcagaatggtccgctgcagacctacccacctgtg
tacccacctgcaggctactacggcgctcctcctccacgtcagaactaccccaacatttct
gccccgggcaaagcgccggtcacaagcagcgccagctactaccagaaccaccagcagcgt
catgtagctccgccttcgtacggcgccggcgcgccgcctcaaccgtacgccaccgtcccg
tcttcagccccgcctccttcaaacgcccagtacagccagccgcagcagcagcccccctac
gctcctccggggtcttactacgctcagcagtcgtacctgtcttcttcagcgcagcttcat
catcatcatcatcatcatcatcagcctagtttggtctcggccccggcgagcgtccccgga
gcgcccgtctaccctgtcgcctcctacccttctgctccaggaagttcccagtatgggacc
ctcagcacctcccagacctccaccacacctcaggctccgcccacccagatgggagcgcca
ttacatcactacccggcgccgcctcctacgtcagcgctgcagcctgggtacgatgtggcg
gctcacgctccgctgacggcggtgaacgggaaaggaagcacagcggcggtccagaccaac
agccaccagcactacgaccaaagccccgccccttacagctacaactcctacagcggggcg
acacgaggcgggggcggtgcggaccgacctccctcaggaacccccaacgcttcagtccac
tcgtccccgggtcacccctcaggcctgcagtatggatatgttgctaatagtggagctagc
tccgcctctgccgctacctcgggcccagctggagccctgtcttcatccggctctgaggat
gaggaggacgatgaggaggaggaggatgaggaagcaggcggcgacacgtcgtcctccagc
accggcagcgcctctccggttccaaacaactatgattccctcgaaggcggcagctttcca
gattccatgcctccttcgaacgatgcgaccaatcagggtcaaccttacggtagctatggt
taccagaacctgcagcccacctatcagcagggaccgacccaacacactgacgggcccccg
tctcagaacctctacggccagccgggttatcagcagtaccctcaggtgggaccgcagccg
ttccccagcctctcccagctgtctgcagccctggggggtctcagcggggtcccggagctg
gaggtggaggccctgagrccggtcaacctgctgcaggagaggaacctgctgcccccgagg
ccctcggagggcccagaacccaacatcagccccgacctgaagaaggtcaactgcagcccg
cagaccttcaggtgcaccctgaccagcattccacaaacccaggctttactcaacaaggcc
aggctccccctggggctcctgctgcaccccttcagagacctgcagcagctgccggtcatc
acctccaacaccatcgtccgctgccgctcctgccgcacctacatcaacccgttygtcacc
tttctggaccagcgccggtggaagtgcaacctctgctatcgggtcaacgacgtaccagat
gagtttatgtacaacccagtgacgaggtcttacggggagccacacaagaggcccgaggtc
cagaactccacggtggagttcatcgcctcctcggactacatgctgcgacctccacagccg
gctgtctacctgttcgtgctcgacgtgtcccacaacgccgtggaagcggggtacctcagg
ttcttctgtcagtctctcctggagaacctggagaagatccccggggacactcgcacccgg
gtgggttttctcaccttcgacagcaccgtccacttctacaacctgcaggaggggctgtcg
cagccgcagatgctagtggtgtcagacatcgacgatgtctttattccgtctcacgacagt
ttgatggtgaacctaaaggagagccacgagctggtgaaagagctgctgacgtcacttcct
gccatgttcagtcagagyagagagacgcacagcgccctgggtccggccttacaggcagcc
ttcaagctcatgtcgcccaccggcggccgcgtcaccgttttccagwctcagctgccgacg
ctgggcgccgggaagctgcagtcgagagaagaccccaaccagcgctccagcaccaagagc
gtgcagcacctcggccctgcgacagatttttataagaaactggctctggactgctcggga
cagcagatcggagtggatctgtttctcctcagctcgcagtacgccgacctggcttcgctc
gcctgcatgtccaagtactcagcaggaagtgtcttctactacccgtccttccatcacgcc
cacaacccggcccagctggagaagttccagaaggatctggagcgctacctcagcaggaag
atcggcttcgaggccgtcatgagaatacgatgcactaaaggattgtccatccacacgttc
cacgggaacttcttcgtgcgctccacggacctgctgtctctggccaacgtgaacccagac
tctgccttcgccgtccagatgtccatcgaggactctctggcggactcgtctctggcctgt
ttccaggcggctctgctctacacgtccagtaaaggaaaaaggcgaatccgagtccacaca
ctgtgtctgcccgtcgtcagtcagctgagtgacgtttacgcaggagctgacgtccaagct
gtcacctgtctactcgccaacatggccatcgaccgctcggtgtcgtccagcctgtcggac
gcccgcgacgccgtggtcaacgccgtggtgga
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