Austrofundulus limnaeus (annual killifish): 106531541
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Entry
106531541 CDS
T06063
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106531541 (lamc1)
04518 Integrin signaling
106531541 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106531541 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Death
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
106531541
NCBI-ProteinID:
XP_013882888
UniProt:
A0A2I4CSC8
LinkDB
All DBs
Position
Unknown
AA seq
1599 aa
AA seq
DB search
MPSLIRSSVRVLAVLAAALTCVRGAIDECVDETQGRAQRCMPEFVNAAFNTSVESTNTCG
TPPEEYCVQTGATGVTKSCHICDANDPRNHHNAVYLTDYNTQQDTTWWQSQTMLAGVQYP
NSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTSESGPWVPYQYYSGSCEKTYQKPN
RGFIRTGENEQQVLCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPSLQDWVTATDIR
VTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVRSSGGRLVCNCKHN
TEGVDCNVCKPFYNDRPWRRATADNANECLPCSCNGKSSECYFDAELYRATGHGGHCRNC
ADNTDGANCERCLDYYYREQSGSRCLPCGCSSVGSDSPQCDSRGVCACKPGVTGEKCDRC
QPGYHSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKENVEGFSCDRCKLGFFNLDPNNPQ
GCLPCFCFQHSSVCDSIEGYSVHTISSSFHRGDEHWSGQRRDGSSVSVQWSPSGQEVSLL
SDDYFPIYFIAPGKFLGNQMLSYGQNLSLNFRVERRDIRLSAEDLILEGAELRTSVPLIA
QGNGYPNDNMQTYVFRLHDTQDNSWKPRLGHLDFQKLLHNLTAIKIRGTYSERSAGYLDD
VSLVTARRGPGVPARWVEQCTCPQGYLGQHCEQCTPGYRRAQPQLGAFSSCEPCNCHGHS
DTCHPDTGACDCQDNTAGLSCERCKDGFYGDATQGTPNDCQACPCPTGATCAVVPRTREV
VCTNCPAGTTGKRCELCDDGYFGDPLGQNGPVRACRACQCSNNIDTNAVGNCNRETGECL
KCIYNTDGFFCDHCKDGFYGNALASDPADKCRACSCSPLGTVNQQTSCSQVTGQCSCLPN
VIERDCSACQAGFFDLRSGDGCKRCDCNAIGSTSGLCDIISGQCECQPGVTGQHCERCEV
NFFGFSPSGCKPCDCDPEGSRSGQCQEDGRCECRPGFVGARCDMCEENYFYNRSVPGCQQ
CPSCYSLVRDKVNQQRQKLQELQSLIDNLGSGQDLVSDQAFEDRLKEAERAIMELLEEAQ
TSKDLDRGLLIRLSSINNTLTTQWNRLQNIRNTVEDTGAQADRARDRVRDAESLMDRARQ
ELDKAKEAVGKVDIKPPTGTGEPNNMTLLAQEARRLADKHKMDADQIEKIAKDANDTSTR
AYNLLLKTLEGEGRTSGEIDLLNRKYDEAKKLAKDLEKQANQVQAEAEEAGNQALKIYAN
LTSLPPVDTTPLEEEANKIKKEASDLDQLIDKMEKEYNELRDDLRPKELEVRKLLEKGKS
EQQTADQLLARADAAKALAEEAAKKGQSTFREAETILDDLRDFDRRVNDNKTAAEDAMKK
IPSINATIMAANEKTRQAEASLGNAAADARDAKDKAEEAERIASNVQKGSAKTKEEAEQA
LQDTNKLDGDVDDMMEQLSAAEQELRRKKEEADSDMMMAAMASDSAKEAEDNARKAKSTV
KTVLKLISTLMEQLGNIDKVDLSKLNQIDESLKRAKDKMKDSELDRKLAELNDVARTQED
MINDYDRQIRDIRADIANLNDIKNTLPEGCFNTPSLEQP
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtttgatccgaagttcggtccgggtcctggcggtcctggcagcggctctgacg
tgcgtccgcggcgccatagacgagtgcgtggacgagacgcaggggcgcgcgcagcgctgc
atgcccgagttcgtgaacgcggccttcaacacctcggtggagtccacgaacacctgcgga
accccacctgaggagtactgtgtccagaccggggccaccggggtcaccaagtcctgccac
atctgcgacgcgaacgacccccggaaccaccacaacgccgtgtacctgacggactacaac
acccagcaggacaccacctggtggcagagccagaccatgctggccggggtccagtacccg
aactccatcaacctgaccctgcacctcggtaaggcctttgacatcacctacgtcaggctg
aagttccacaccagcagaccggagagctttgccatctacaagcgcaccagcgagtccggg
ccctgggtgccgtaccagtactacagcgggtcctgtgagaagacctaccagaaaccgaac
cgcgggttcatccggaccggagagaatgagcagcaggtgctctgcaccgacgacttcagc
gacatctcgccgctcactggaggaaacgtagccttctccacactggagggccgacccagt
gcctacaactttgacaacagcccctccctccaggactgggtgacggccacagacatcagg
gtgaccctgaaccggctcaataccttcggagacgaggtcttcaacgacccgaaggtcctg
aagtcctactactacgccatctcagacttcgctgtgggaggaaggtgtaagtgtaacggc
catgccagtgagtgtgtgaggagcagcggcgggcggttggtgtgtaactgtaaacacaac
acggagggcgtcgactgtaacgtctgcaaaccgttctacaacgaccggccctggaggaga
gccacggctgataacgccaacgagtgtctgccctgcagctgtaacgggaagagttctgag
tgttactttgatgctgagctgtaccgggccacgggtcatggaggtcactgcaggaactgt
gccgacaacacagacggagctaactgtgagcgctgcctggactactactacagagagcag
agcggcagccgctgcctgccctgtggctgcagctccgtaggttctgactctccacagtgt
gacagcagaggagtgtgtgcgtgtaaaccaggagtcaccggagaaaagtgtgaccgctgc
cagccaggataccacagtctgaccgaggccggctgtaggccgtgctcctgctctccttca
ggcagcactcaggagtgtgacgtcaacacggggcagtgtcgctgcaaagagaacgtggag
ggcttcagctgtgacaggtgcaaacttggcttctttaacctggatccaaacaaccctcag
ggctgcctgccctgcttctgcttccagcactcgtctgtgtgcgacagcatcgagggctac
agcgtgcacaccatcagctcctccttccacagaggtgacgagcactggagcggtcagagg
agagacggctccagcgtctccgtccagtggtcccccagtggacaggaagtgtccctcctt
tctgatgactacttccccatttacttcatcgctccagggaagttcctggggaaccagatg
ttgagttacggacagaacctgagtttaaacttccgggtggagaggcgggacatccggctg
tcggccgaggacctgatcctggagggggcggagctacggacatccgtccccctcatcgct
cagggcaacggctatcccaacgacaacatgcagacctacgtgttcaggctccatgacact
caggacaacagctggaagcctcggctcggccacttagacttccagaaacttctccataat
ctgaccgccatcaagatccgtggtacctacagcgagagaagtgctggttacctggacgac
gtctccttggtgacggcgaggcggggcccaggtgttccggcccgttgggtggagcagtgc
acctgtcctcagggttacctgggtcagcactgtgagcagtgcactccaggataccgccgc
gcccaacctcagctcggagccttcagctcctgtgagccgtgcaactgccacggtcacagc
gacacctgccaccccgacaccggagcgtgtgactgtcaggacaacacggctggtttgagc
tgtgagcgctgtaaggatggtttttatggcgacgccactcaggggacacctaacgactgt
caggcgtgtccctgccccacgggggccacgtgtgcggtggtccccagaaccagagaggtg
gtctgcaccaactgtcctgccgggaccacaggtaagcgttgtgagctctgcgacgacggg
tatttcggggaccctctgggtcagaacgggccggtccgagcctgccgggcctgccagtgc
agcaacaacatcgacaccaacgccgtggggaactgcaaccgcgagaccggagagtgcctg
aagtgcatctacaacaccgacggcttcttctgtgaccactgcaaggacggtttctacggc
aacgccctggcctccgaccccgcagacaagtgcagagcctgctcctgctcccccctgggc
actgtgaaccagcagaccagctgctctcaggtcacaggtcagtgttcgtgtctgcccaac
gtgatcgagcgtgactgcagcgcctgccaggccggcttcttcgacctgcggagcggcgac
ggctgcaaacggtgtgactgtaacgccatcggctccaccagcgggctgtgtgacatcatc
tctggacagtgcgagtgtcagccaggcgtcacgggtcagcactgcgagcgctgcgaggtc
aacttcttcggcttcagcccgtcgggatgcaaaccctgtgactgtgaccctgaaggctct
cgctcaggtcagtgtcaggaggacgggcgctgtgagtgccggcccggcttcgtgggcgct
cgctgcgacatgtgtgaggagaactacttctacaaccgctcggtgcccggctgccagcag
tgcccctcctgctacagcctggtccgggacaaggtgaaccagcagaggcagaagctccag
gaactccagagtctgatcgacaacctgggctcgggtcaggacctggtcagcgatcaggcc
ttcgaggaccggctgaaggaggcggagagggccatcatggagctgctggaggaggctcag
accagcaaagacctggaccgaggcctcctgatccgcctgagctccatcaacaacacgctg
accacgcagtggaaccgcctgcagaacatccgcaacacggtggaggacacgggcgcccag
gccgaccgcgcccgggaccgggtccgcgacgccgagagcctgatggaccgcgcccggcag
gagctggacaaggccaaggaggccgtgggcaaagtggacatcaaaccgcccaccggcacc
ggagagccaaacaacatgacgctgctcgcccaggaggcccgccggctcgccgacaaacac
aagatggacgccgaccagatcgagaagatcgccaaagacgccaacgacacgtcgacccga
gcgtacaacctgctgctgaagaccctggagggagagggcaggacgagcggcgagatcgac
ctgctcaacaggaagtacgacgaggccaagaagctcgccaaggatttggagaaacaggcg
aaccaggtccaggccgaggccgaggaggctggaaaccaggctctgaagatctacgctaac
ctgaccagcctcccgccggtcgacacaacgcccctggaggaggaggccaacaagatcaag
aaggaggcgtcggacctggaccagctgatcgacaagatggagaaggagtacaacgagctg
cgggacgacctgaggcccaaagagctggaggtccgcaagctgctggagaagggcaagagc
gagcagcagaccgccgaccagctgctggcccgagccgacgccgccaaggccctggctgag
gaggccgccaagaagggccagtccacgttcagagaggccgagaccatcctggacgacctg
cgagacttcgaccggcgggtcaacgacaacaagacggctgcagaggacgccatgaagaag
atcccctccatcaacgccaccatcatggccgccaacgagaagacgcggcaggccgaggcc
tcgctcgggaacgccgccgccgacgctcgagatgctaaagacaaagcagaggaggcggag
aggatcgccagcaacgtgcagaagggctccgccaagaccaaagaggaggcggagcaggcg
ctgcaggacaccaacaagctggacggagacgtggacgacatgatggagcagctgagcgcc
gctgagcaggagctgaggaggaagaaggaggaagctgacagtgacatgatgatggcggcg
atggcgtccgacagcgccaaggaggcggaggacaacgcccgcaaggctaagagcacggtg
aagacggtcctgaagctcatctccaccctgatggagcagctgggaaacatcgacaaggtg
gacctgagcaagctgaaccagatcgacgagtccctgaagcgggccaaggacaagatgaag
gacagcgagctggacaggaagttggcggagctgaacgacgtggcgcgcacgcaggaggac
atgatcaacgactacgaccggcagatccgcgacatccgcgccgacatcgccaacctcaac
gacatcaagaacacgttacccgagggctgcttcaacacgccgtcgctggagcagccttag
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