Austrofundulus limnaeus (annual killifish): 106531941
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Entry
106531941 CDS
T06063
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106531941 (smc4)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
106531941 (smc4)
Condensin II
106531941 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
WEMBL
AAA_29
TPR_MLP1_2
ERM_helical
HIP1_clath_bdg
APG6_N
DUF1482
Motif
Other DBs
NCBI-GeneID:
106531941
NCBI-ProteinID:
XP_013883352
UniProt:
A0A2I4CTN9
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MPSKTAKSSTAKTRGRGLQPRDDSEDELSVPPPEPKSNGKEEEAPPTTADQSQGEAAEAV
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGDQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDQHKDVQSCCVEVHFQKIIDKEGD
DYEVIPNSKFYVSRTANKDNSSAYYINSKKATFKEVGALLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTVHDEGMLEYMEDIIGSCRLKEPIQTLARRVELLNEQRGEKLNRVKLVEK
EKNALEGEKNKAVEFLTLENDIFKHKSHLYQYYVHDLQKRVMEKEQEKQKILXDTKELAE
KNAKISQEMEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKT
LQKQLEKDQKKLEEVRSVPASSEEAISEATARKEDLEKQKAKEEEKLKEVMESLKEETSG
LQQDKEKKEQELMELSKAVNETRSRMDLAQSELDIYLSRHKTAVTQLNTAKQTLQTTSET
LQERRAAIKDLQVTVPEKEQELKKDQEELQQLLKVDTETREVVRDLRQKVDEAKSSLSSN
RSRGKVLDALMQLKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDTAQK
CVTFLKEQNIGVATFIGLDKMKVWEKNMAPVRTPDDCPRLFDMVRLNDDSVRPAFYFALR
DTLVAKDMEQATRLAFQKDKRWRVVTLKGQIIEIAGTMTGGGRVMKGRMGSSISAEFSQV
ELDRMESKLNEKVSRLQSCQERKLQLEENIQRLQPQLREMKNTLEKYSNSMSSLADQETH
LKLQIKELEANVLAAAPDKTKQKQMEKSLEAFKKDYESASSKAGKVENEVKRLHNLIVDI
NSHKLKAQQDKLDKINKELDDCSSTITKAKVAIKTADRNLKKCEESIARVQAELEENEKL
KAELTEQLKKLEDEAGEIMKACQEAEAALPEVQEQYQNVTKEIKTLQQQEHALQEESLNV
RLSIEHIDALITKHNGKIKYWQDEAAKLSLHTIDGQPAEELRVFPPAELDAVSDPNVIVD
KMSTLEVQCGQIKPNLGAIAEYKKKEELYLQRVAQLDEITTERDRVKRAFEDLRKQRLNE
FMTGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVGINPKTIGFKENLAMSV
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaaaagctccacggccaagacaagaggcagagggctgcagcct
cgggatgactccgaggacgagctgagtgtaccccctccagaaccaaagtccaatggcaaa
gaagaggaggcaccgccgacaactgctgatcagtctcagggggaagctgccgaggcggtt
gataaccgaagtctggaggaaattctcggcagcatccctccacccccgcccccagcaatg
accaacgaaccgggcgctcctcgcctcatgataacgcatttagttaatcgcaacttcaag
tcgtacgcaggcgaycagattcttgggcctttccacaagcgattttcctgtatcattggt
cccaatggaagtggaaagtccaatgtgatagattcaatgctctttgtgtttggatacaga
gctcaaaagatcagatcaaaaaagctctcagtgctgattcacagctctgatcaacacaaa
gatgtgcagagctgctgcgtggaggtgcattttcaaaagattattgataaggaaggagat
gactacgaagtcatccccaacagcaagttctacgtttccaggactgccaacaaagacaat
tcctcagcctactacatcaatagcaagaaagccacattcaaagaagtgggggctttactc
cgaagccatggtattgaccttgaccacaacagatttctgatcttacagggtgaggtcgag
cagatcgccatgatgaaacctaaaggtcaaacggtgcacgatgaagggatgctggagtac
atggaggacatcattggttcgtgtcgactcaaggagccgattcaaactctggctcgtcgt
gtcgagcttctcaatgagcagagaggagagaagctaaaccgagtgaagcttgtggaaaag
gaaaaaaatgctttggaaggagaaaagaacaaagctgtggagttcctgaccctggagaat
gatatctttaaacacaagagtcacctttaccaatattatgttcatgatctgcagaaacgt
gtgatggagaaagagcaggagaagcagaagatcttggasgacaccaaggaactcgcagaa
aaaaatgcaaagatctcacaagaaatggaaaaaatgaaccaagagctcaaaaacgtagaa
aaaaaacaaaataagctcaacaagtacattgaaacccagaaggaaaagttcacccagctg
gacctgcaggatgttgaagtgcgtgagaagattaaacactccaagagcaagaacaagaca
ttgcagaagcagctggaaaaagaccagaaaaagctggaggaagtgcgcagcgtaccagcc
agcagcgaagaagccatctctgaggcaacggcccgcaaggaagacctggagaaacagaaa
gcaaaagaagaagaaaaactgaaggaagtgatggaaagtctgaaagaagaaaccagtggc
ttgcagcaggacaaagagaaaaaggagcaggaactcatggaactgagcaaagctgtaaat
gagacccgctcccgtatggatcttgcccagtctgagctcgacatctatcttagccgccac
aaaacagctgtaacccagctcaacacagccaaacagacgcttcagacgacttcagagacg
ctgcaggagcgccgtgccgccattaaagacctacaagtcacagttcctgagaaggagcag
gaactcaagaaggaccaggaggagctgcagcagcttctgaaggtggatactgagaccaga
gaagtggtgagagatctgaggcagaaggtggatgaagccaagagctccctgtcctccaat
cgcagtcgaggaaaagtcctggatgctctaatgcagctgaagaagagtggcagaattcct
ggcatctatggaagactgggagatcttggagccatagatgagaagtacgatgtggccatt
tcttcatgttgtggtgctctggacaacatcgtcgtagacaccatcgacacagctcagaaa
tgtgtcactttccttaaagagcagaatatcggagttgccactttcattggccttgacaag
atgaaggtgtgggagaagaacatggcccctgttcgcactccagacgactgccctcgtctg
tttgacatggtgcgactgaacgacgacagcgtgcggccagccttctacttcgccctgagg
gacacactcgtggccaaagacatggagcaggccacgaggctggccttccagaaggacaaa
cgctggagggtggtcaccctgaagggacagatcatcgagatagctggaaccatgactgga
ggaggaagagtgatgaagggcaggatgggttcttctattagtgctgagttctcccaggtg
gagcttgatcgtatggagagcaaattgaacgagaaagtgtcacggctacagagctgccaa
gagagaaagctgcagctggaggagaacatccagcgcctgcagccgcagctcagagagatg
aagaacactctggaaaaatactccaacagcatgagtagtttagctgaccaggagactcac
ttgaaacttcagattaaggagcttgaagccaacgtgctggcagcagccccagacaagacc
aaacagaaacagatggagaagagcctggaggcattcaaaaaagactatgagtcagcgtcc
agtaaggctgggaaggtggaaaatgaggtgaaaagactccacaacttgatcgtggacatc
aacagccacaaactgaaggctcagcaggacaaacttgacaagattaacaaggagctggat
gactgctcctccaccataaccaaggccaaagtagccataaagacagctgatcgaaactta
aagaagtgtgaggagagtatcgctcgtgttcaagctgagctggaggagaatgagaagctg
aaggccgagctcacagaacagctgaaaaaactggaagacgaggccggagagatcatgaaa
gcctgtcargaagcagaggcggctctgcctgaggttcaggaacagtatcaaaatgtgacc
aaagagataaagaccctgcagcagcaggagcacgctctacaggaagagtccctgaacgtc
cgcctgtccatcgagcacatcgacgccctcatcactaaacacaacggcaagatcaagtac
tggcaggatgaggctgctaagctttcccttcacaccatcgatgggcagccagcagaggag
ctccgtgtgtttcctcccgctgagctcgacgccgtctctgatccaaacgtcatcgtcgac
aagatgagcaccttagaagtccagtgtggtcagataaagcccaacctgggggccatcgct
gagtacaagaagaaggaggagctgtacctgcagcgagtcgctcagctggatgaaatcacc
acagagagggacagagtcaaacgcgccttcgaggatctgcgtaaacagcggctcaacgag
ttcatgacgggattcaacatcatcaccaacaagctgaaggagaactaccagatgctgacg
ctgggaggagacgcagagctggagctggtggacagtctggaccccttctctgagggcatc
atgttcagtgttcgtcctccgaagaaaagctggaaaaagatcttcaacttgtcaggagga
gagaagaccctcagctccctggctctggtgttcgctctgcaccactataaacccacaccg
ctctacttcatggatgagatcgacgccgctctggacttcaaaaacgtctccatcgtggcc
tgttacatatatgaacaaactaagaatgctcagttcatcatcatctctttgaggaacaac
atgtttgagatcgcagatcgcctcatcggcatctacaaaactcacaacacgacaaagagt
gtcgggatcaaccccaagaccatcggcttcaaagaaaacctggccatgtctgtgtag
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