Austrofundulus limnaeus (annual killifish): 106531944
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Entry
106531944 CDS
T06063
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106531944 (ctcf)
03036 Chromosome and associated proteins [BR:
alim03036
]
106531944 (ctcf)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106531944 (ctcf)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106531944 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_15
LIM
zf-C2H2_6
DTHCT
zf-WIZ
zf-C2H2_ZN142
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
106531944
NCBI-ProteinID:
XP_013883359
UniProt:
A0A2I4CTQ1
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MEGEVVTIEAAQAAAMAAEGKVLPEGGEALMQAAQGDVTGNMDMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGIGQLQLVQVPVSTATVEGLQATFVE
ASAANKDVEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQDELHGTREEEEEEEE
EEDEETAELETAVPQQDDPQWSKDPDYQPITTVRKGKKGKKSRLRYAEGDRDMDVSVYDF
EEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHE
KPFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKK
CRYCDAVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQC
DKTFRQKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCMGEPTGDENGI
PTPKKGRRGRKRKMQSRRDDDDDDDEDNTEGELDEIEEEDEMLVDMEVEQAAPVVPIPAP
VEPPVKRKRGRPPKIKPDAAAIIXVEDEATGEVDDIIVKKEVGTELDDIEAEEVVIGGVK
STIQMEELAEEGEAAPEVQLAEAPPNGDLTPEMILSMMDR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtcaccatagaggcagctcaggctgcagccatggccgccgaagga
aaggtcctgccagaaggcggggaggctttgatgcaagcggcgcagggcgacgtgaccggg
aacatggacatgatggtgatggatgctcttgatccgactctgttgcaaatgaagacggag
gttttggaaggaggcggcacagtaactgttaccggtggagatgagggtcagatcatcacg
ctccaggtggtaaatatggaggaacaagcaggtgctgcgttgggtattggtcagcttcag
ctcgtacaggtacctgtgtctacagctactgtagagggactccaggccacttttgttgaa
gcgtcagcagctaacaaggatgtagaaccagttatttgtcacacacttcctttgcctgaa
ggtttccaggttgtaaaagtgggcgccaatggtgaagttgaaacagtggagcaggaggag
ctccaagctgcccaggatgagctccatggaacgagggaggaggaggaggaagaagaagag
gaggaggacgaggagacggcagaactggaaacagctgtccctcaacaagacgacccgcag
tggtcgaaagacccagattaccagcccattaccacggtccgtaaggggaagaaagggaaa
aagagtcgccttcgctacgcggagggtgatcgggacatggacgtgtctgtgtatgacttt
gaggaggagcagcaggaggggctgctgtcggaggtgaacgcagagaaggttgtgggcaac
atgaagcctccgaagcccactaagatcaagaagaaaggcgtgaagaagactttccagtgt
gagctctgtagctacacctgtccaagacgctctaatctggaccgtcacatgaagagccac
acagatgagagaccacacaagtgtcacttgtgtggacgagccttcaggacagtcacactg
ctgagaaaccatctcaatacacacacaggcacycggcctcataaatgcacagattgtgac
atggcatttgtgaccagcggtgagttggtgcgccatcgccgctacaaacacacacacgag
aagccgttcaagtgttccatgtgtgactattccagtgtggaggtgagcaagttgaaaagg
cacatccgctctcatacaggggagcggcccttccagtgcagcctgtgcagctacgccagc
agagacacttacaagctgaagagacacatgagaacacattcaggtgagaagccgtacgag
tgctacatctgccaygctcgtttcacacaaagcggcaccatgaagatgcacattctgcag
aaacacacrgagaacgtggccaagttccactgcccacactgtgatactgtcatcgcacgc
aagagtgaccttggtgttcacttgaggaagcagcactcgtttattgagacgggcaagaag
tgtcgttactgtgatgctgtcttccatgagcgctatgctctcatccagcatcagaagact
cacaaaaatgagaagcgyttcaagtgtgaccagtgtgattactgctgcagacaggaacgc
cacatgataatgcataarcgcacacacacgggggagaaaccgtttgcctgtagccagtgt
gacaagacattccgtcagaaacagctgctggacatgcacttcaagcgctaccatgatccc
aactttgtccccactgcttttgtctgcagcaagtgcagcaagacgttcacccgcaggaac
accatgctgcgtcacgccgagaactgcatgggtgaacctactggagatgaaaatggaatt
ccaactcccaagaaagggcgccgtggcaggaagagaaagatgcagtccaggagggatgat
gatgacgacgacgatgaagacaacactgagggagaactggatgaaatcgaggaagaggat
gaaatgttagtcgacatggaggtggagcaggccgcaccagttgttcccattccagcmcca
gtggagcccccagtcaagaggaaacgtggacgccccccaaagattaagcctgacgcggct
gccatcatccrcgtggaggacgaggccaccggagaggtcgatgacatcatcgtgaagaag
gaggtcggcactgaactagacgatatcgaagcggaggaggtggtgatcggcggcgtcaag
tcgaccattcagatggaggagctggctgaggaaggggaagcggcgccggaggtgcagctg
gctgaggcccctcccaatggagacctgactcctgagatgatcctcagcatgatggaccgg
tga
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