Austrofundulus limnaeus (annual killifish): 106532030
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Entry
106532030 CDS
T06063
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04136
Autophagy - other
alim04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106532030 (atg4b)
04136 Autophagy - other
106532030 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106532030 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106532030 (atg4b)
03029 Mitochondrial biogenesis [BR:
alim03029
]
106532030 (atg4b)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106532030 (atg4b)
Membrane trafficking [BR:
alim04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106532030 (atg4b)
Mitochondrial biogenesis [BR:
alim03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106532030 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
106532030
NCBI-ProteinID:
XP_013883470
UniProt:
A0A2I4CU03
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKEEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLSRDWRWAKGQKQREEYISILNAFIDKKD
SYYSIHQIVFFLYAAAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNT
VIIEEIKRLCMPWLDFSEPCGGAEGAGELNGCLEGACALAEEETALWKPLVLLIPLRLGL
SDINEAYIDTLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDS
QVPDETYHCQHPPCRMQICELDPSIAVGFFCRTEDEFDDWCMRIRRLTCKKGGLPMFELV
DSQPAHMVSVDALNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctacattgacgtacgacacacttcgttttggagagtttgaagattttcct
gagacctcagagcctgtgtggatcttggggaaagagtacaatgcactcacagagaaagag
gagattttatcagacgtcacgtcgcggctgtggttcacttacagaaaaaactttccgccg
attgggggcactggaccaacatcagacacaggatggggatgtatgttacggtgtggccag
atgatcctaggagaggccttggtgtgtaggcacttgagtagagactggaggtgggccaaa
ggccagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agctactattccatccaccaaattgttttcttcctgtacgctgcagcccaaatgggagtc
ggagagggaaagccaatcggacagtggtatggaccaaacacagtcgcccaagttctaaag
aagctggcagtgtttgatacgtggagcagattagttgtacacgtggccatggacaacact
gtgatcatcgaggagatcaagcgtctttgcatgccgtggctagacttctcagagccgtgt
ggaggagcagagggagccggggagctgaacggctgcctggagggagcgtgcgccctggct
gaggaggagacggctctctggaaacccctggtcctgctcatccccctcaggctgggcctg
agtgatataaacgaggcctacatcgacaccctaaagcaatgcttcatgctgccacagtcc
ctgggggtcattgggggcaaacctaacagtgcccattacttcattggttatgttggagag
gagctgatctatttagacccacacacaacccagcctgcagtggagccatgtgaagacagc
caggtcccagatgagacgtaccactgtcagcacccaccctgccgcatgcagatctgtgaa
ctggacccatccatcgcagtgggttttttctgcagaacagaagatgagtttgacgactgg
tgcatgcgcataagaagactgacctgcaagaaaggagggctgcccatgtttgaattggtc
gacagtcaacccgcccacatggtcagcgttgatgcacttaaccttactcctgatttctca
gactcagacagactggaacggttcttcgattcagaagacgaggagtttgagatcctgtcc
ttgtga
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integrated database retrieval system
