Austrofundulus limnaeus (annual killifish): 106532103
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Entry
106532103 CDS
T06063
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106532103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106532103
03036 Chromosome and associated proteins [BR:
alim03036
]
106532103
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106532103
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106532103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
106532103
NCBI-ProteinID:
XP_013883549
UniProt:
A0A2I4CU87
LinkDB
All DBs
Position
Unknown
AA seq
1631 aa
AA seq
DB search
MVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPANPMAPGTGGLFGGATA
TSSAATGLFGGSASNSSFNFGANKTTFGATATGTFGTTTGGMFGQPAQQPAGSLFKPFGS
TTTTQSTGFSFGNTNTMGQPNTSAMGLFGSTAASQPGGLFGTTQTSTATGFGAASGLFGA
PSAGFGNVSQPSLFGPKTTGFGTTTTSAPSFGTGTGLFGAKPALSLGTGTNTSNFGFGGT
AAGGGLFGNKATTGGLGTGLGTSFGTVGTGPSLFGNNQNKLGTTLGTMGTFGTTGFXSGT
TSLGFGAPQQQPVALTDPNSTAVQQAVLQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERL
KPTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFVP
RKSIKKLVLKNLNSSQYSSPLNKDSDDLASPSDYPHNGHSQTDDELREASGPSSRTHDDP
EVTQFYVNPIAKPIPHGRAPPALQDTISDLNMHKQQRSGLELSSDDVSVSLGEESLLEDR
EEEEEEEPQESQQSPHPAGIVLNRVGYYTIPSLEDLADMVDENGECVVENFTVGRKGYGS
IFFPGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTSC
TQIRSPERLADMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDV
PPKTDPKKLKTCSLPASGLLPPPPLQVAPQAQSAAVELAGGVAELDSDMADITQSLSAES
APGAEEGGELPAADTEAWERDDVSASGHIASSLGINPHTLQIMKASLFTEEEEEGDMFLH
HAATKVSEVSSPRLGPLSRPSVGGLLQTRFTSSLFSDTPRPPPSLSRGFPVPADPSRPLQ
WKGPGPASFQLPPRAPEPPIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVG
WGPAWTLAHCGKRISSPQSKQLEYQEVSSKTDFSFLPKPARTKPLTESPYKVVLEQLVGL
DPPQKKLSEDDDDESQAVLERPLEICLKNSTVSIPDGTTCPVVRPQEGVAALHHYAEWIC
ELNAKMGGAEPLLGDWAEVWTLCEALWGRLGPPDQEPDPEPPGEYEQQLQRRRSFSAWLS
RGASCRVEEEACLSGKGHHTHAIFSFLTGGRISEACRLAQKEGDHRLSLLLSQAVGSQLC
RDLLALQLADWNQLQTDCYLSEERLRIFSLLAGKPVWQSSDSVVNVCSELDWKRCVAVHL
WFMLPPTASVADALAKYEAAFQGSTEAGRYACAPLPPYLEGEEPDEEEEESSRPLYDLCF
HLLKLYSVRHYSLQQLLDPLAVTWNRLDYRLSWHLWGVLQALNYSHLSSSRQGLLHTSYA
SQLESAGLWHLSVFILLHIPDHSQRERAVRQVLTQHCSLQETDQSVLRERFLTDQLLVPE
RWIHEAKATRAQRDGDRHQQALHLYRAGHWNRCHRLLIQHLASDCIINDNHDYLLDFLEG
LGVPERSATIQDWDTAGRVYLDYIRVIKSLQLIQQAEAGGYQLEQLYSQVTSLCSRIELL
PCGSARDRLAQSEMAKRVANILRVVLSLQQGEAPLVQLVPHISRLPMPEDYTLEELRGLT
QSYLRQLLVSH
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcaggcgtgaccacgagcatcaacaccaaacaccagtgcatcacggccatg
aaggagtacgagaacaagtctctggaggagctgcggctggaggactaccaggcgggcagg
aagggtccggccaaccccatggctccaggaaccggcggtctgttcggaggcgccacggcc
acgtccagcgccgccacgggtctgttcggaggctccgcctccaactccagcttcaacttc
ggggccaacaagaccacgtttggagccacagctacaggaaccttcggaaccaccacagga
gggatgtttggacagccggcccagcagccggcgggcagcctcttcaagcccttcggttcc
accaccaccacccagagcaccggcttcagcttcgggaacaccaacaccatgggccagccc
aacaccagcgccatgggtctgtttggaagcaccgcggcctcccagcctggaggattgttc
ggaaccacccagaccagcaccgccactgggtttggagcggcctcgggtctgttcggagcc
cccagcgccgggtttggaaacgtctcacagccgagtctctttggacctaaaacgacgggc
ttcgggaccaccaccaccagcgccccgtccttcggcaccggcaccgggctctttggtgcc
aagcccgctctgtccctcggaaccggaaccaacacctctaactttgggtttggagggacc
gctgctggtggaggtctgtttggaaacaaggccaccaccggaggcctggggactggactc
ggaaccagctttggaaccgtcggtaccggtcccagtctgtttggaaacaaccagaacaaa
ctgggcaccacgctgggaaccatgggaaccttcggaaccacgggcttcaycagcggaacc
accagtttgggttttggagctccgcagcagcagcctgtcgccctcacagatccaaacagc
acggcggtgcagcaggcggttctgcagcagcagctgaatgttctggcctactctccgtac
ggagactctcctctgttcaggaaccctctgtctgaccccaagaagaaggaggagcgtctg
aaacccaccaatcccacggcccagaaggcgctgaccacgcccactcactacaagctgacc
ccccggcctgcgacccgggttcggcccaaagcgctcacgtcctccggaggatccaagtct
cagctgttcgacggtctggatgacgacgagccgtcgctcacgaatggagccttcgttccc
aggaagagcatcaagaagctggttctgaagaacctgaacagcagtcagtacagcagcccg
ctgaacaaagacagcgatgacctcgcctcgccctcagactaccctcacaacggacacagc
caaacagacgacgagctccgggaggcttcgggtcccagcagccggacccacgacgacccg
gaagtcacgcagttctacgtcaaccccatcgccaagcccatcccccatggccgagccccg
cccgctctgcaggacaccatcagtgacctgaacatgcacaaacagcagaggagcggcctg
gagctgagcagcgacgacgtgtccgtgtctttgggggaggagtctctgctggaggacagg
gaggaggaggaggaggaggagccacaggagtctcagcagtctcctcatcctgcaggaatc
gttctgaacagggtgggctactacaccatcccctccctggaggacctggctgacatggtg
gatgaaaacggagagtgtgtcgtggagaacttcactgtcggcaggaaaggttacggctcc
atcttcttccccggcgaggtgaacgtgacgggcctgaacctggacgagatcgtccacttc
agacgcaaagaggtcatcgtctaccctgacgataaaaacaagccaccggagggggagggg
cttaacaggcgagctgaggtyaccctggacggcgtgtggcccaacgataagacgagctgc
actcagatcaggagccccgagcgtttggcagacatgaactacgagggccgsctggagaag
gcctccaggaaacagggggcccgcttcctggagtaccgccccgagaccgggtcctgggtr
tttgaggtggctcatttctccaaatacggcctgcaggactctgatgaggatgaagacgtc
ccgcccaaaactgaccccaagaagctgaaaacctgctcacttcctgcctccgggctgctg
ccgccgccgccgctgcaggtggcgccgcaggctcagtctgctgccgtggagctggcaggg
ggcgtggccgagctggacagcgacatggccgacatcactcagagcctgtctgcagagagc
gcgccgggagccgaggagggcggcgagctgccggcggccgacacggaggcgtgggagcgc
gacgacgtgtctgcgtccggacacatcgcctcgtcgctggggatcaacccgcacaccctg
cagatcatgaaggcgtctctgttcaccgaggaagaggaggagggcgacatgttccttcat
cacgcagcgacgaaggtctctgargtctcgtcccctcgcctgggacctctgagccgaccc
tccgtcggaggtcttcttcagacccgtttcacctccagcctcttctcggacactccccgc
ccacctccctctctgtcccggggctttccggtgccggcggacccctcccggcccctgcag
tggaagggtccgggccccgcctcctttcagctgcctcctcgggctccagaacctccaatc
aggaccgtgggagtccggcggctggggggtccggttcctctcaaagagtcagtgactcag
gggaagggggcgctgctcatggacacgggtctgtttgccacccgctccttcagggtgggc
tggggtccggcctggactctggctcactgcggaaaacggatcagctcgccacagtccaaa
cagctggagtaccaggaagtcagctccaagacggacttcagcttcctgcccaaaccagcc
agaaccaaaccgctgactgaaagtccctacaaggtggtcctggagcagctggtgggtctg
gacccccctcagaagaaactcagtgaggatgatgatgatgagagccaggcggtcctggag
cgccccctggagatctgtctgaagaacagcaccgtcagtattcctgatgggaccacctgt
cctgtggtgcgtcctcaggagggcgtggcggcgctgcaccactacgcagagtggatctgt
gagctgaacgccaagatgggcggggccgagcccctcctgggtgactgggctgaggtttgg
accctgtgcgaggccctgtggggccggttgggccccccggaccaggagccggaccccgag
ccgcccggcgagtacgagcagcagctgcagaggaggcggagcttctcggcgtggctgtcc
cgcggcgcctcctgcagggtggaggaggaggcgtgtctgtcggggaaaggtcaccacaca
cacgccatcttcagcttcctgacaggcggcaggatcagcgaggcgtgtcggctggctcag
aaggaaggagaccaccgcctgtccctgctgctgtctcaggctgtgggctctcagctctgc
agagacctgctggccctgcagctggcagactggaaccagctgcagacagactgttacctg
agtgaggagcgcctgcgcatcttcagcctgctggctgggaaacctgtctggcagtcctcg
gactctgtggtgaacgtgtgctcagagctggactggaagcgctgcgtggccgtccatctt
tggttcatgttgcctccaacagcgtctgtggccgacgccctcgccaaatatgaagctgcc
ttccagggatccacagaggcagggaggtacgcctgcgcccccctgcctccttacctggag
ggggaggagccagatgaagaggaggaggagtccagcaggccgctgtacgacctgtgcttc
cacctgctgaagctctacagcgtcagacactacagcctgcagcagctgctggacccgctg
gccgtcacctggaaccgcctggactacaggctgagctggcacctgtggggggtcctgcag
gctctgaactacagccacctgagctcctccaggcagggtctgctgcacaccagctacgcc
tcacagctggagagtgctggactctggcacctgtctgtcttcatcctgctgcacatccca
gaccacagccagcgggagcgggcggtccggcaggttctgacccagcactgctcgctgcag
gagacagatcagtcggtcctcagggagcggttcttgacggaccagctgctggtcccagag
cggtggatccaygaggccaaggccacccgggcccagagggacggggaccggcaccagcag
gccctgcacctgtaccgggccggacactggaaccgctgccaccggctgctgatccaacac
ctggcctcagattgcatcatcaatgacaaccacgactacctgctggacttcctggagggt
ctgggggtccctgaacgcagcgccaccatccaggactgggacacggcagggagggtctac
ctggactacatccgggtcatcaagtccctgcagctcatccagcaggctgaggcagggggg
taccagctggagcagctgtacagtcaggtcacgtctctgtgcagcaggatcgagctgctg
ccctgtggctcggcccgggaccgcctggcccaatcagagatggcgaagcgcgtggccaac
atcctgcgggtggtcctgagcctgcagcagggcgaggcccccctggtccagctggtgccc
cacatcagccgtctgcccatgcctgaggactacaccctggaggagctgaggggtctgacc
cagtcctacctgagacagctgctggtgagccactga
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integrated database retrieval system
