Austrofundulus limnaeus (annual killifish): 106532126
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Entry
106532126 CDS
T06063
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106532126 (ttf1)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
106532126 (ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
106532126
NCBI-ProteinID:
XP_013883586
UniProt:
A0A2I4CUC3
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MIAPEVSRSAHKKTKRKLEPPASVDSDAPVKNKKKKKKEKEEKAKETEEEFHLHPADEPT
LSPEKKKKKKKRANEEEEEFNLHPPDELMLNPEKKKXKKKKKKRANEEEEEFNLHPPDEL
MLNPEKKKKKKRANDEEEEFNLHPADELMLNPEKKKKLECQKNPPVPVDIDAPEKKKKAK
KQKKKKTEECVIEVTSQREKKKKKKKQTSVTTESPQVSTETQVTTTKEKRNDGGKNKMKE
LEKTSSSNEDENRSRLESLDWKLVEELEEFIPGVKNKSVSFIRILLRDDLHRFRSFRQQG
IALRRGRFSMEENRRIISNVSDFLALTGIKSAVDLFPQLSRETSTFTRKMRKTYHFQERL
AEGIPRPVSVVYTRALKLLDDINRVGRFSKEEVECLKKLQRIHGNNWATISKKMDRSNHS
LQKRFSTLDSNHGYWTEEEELRLKRAVKDYYETQIQQDPPGSGLSRNQLFNNLPWKPISE
KVQTRSWLQCRKKWFNILKDRLTTDGSVFSRGEENCQAKICLINTLYDMCVEDPADIDWD
EVARTVGQVTPMCVQKAFNRLKVNKVPNWTRLSYDEIISFMKLHVVPYLMSRVKSEARWA
ERREQYGEDRYDLAQIFDGDDLDGS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatagctccagaggtctcgcgttctgctcacaagaagacaaaaaggaagctggaacct
cctgccagtgtcgactctgatgctcctgtgaagaacaagaagaagaagaagaaggagaag
gaggagaaagcaaaggaaacagaggaggagtttcaccttcatcctgctgatgagccgacg
ctgagtccagagaagaagaagaagaaaaagaagagagcaaatgaagaggaggaggagttt
aaccttcatcctcctgatgagctgatgctgaatccagagaagaagaagnagaagaagaag
aaaaagaagagagcaaatgaagaggaggaggagtttaaccttcatcctcctgatgagctg
atgctgaatccagagaagaagaagaaaaagaagagagcaaatgacgaggaggaggagttt
aaccttcatcctgctgatgaactgatgctgaatccagagaagaagaagaagttggaatgt
cagaagaaccctcctgttcctgtcgacatcgacgctcctgagaagaaaaaaaaggcgaag
aagcagaagaagaaaaagacagaggaatgtgtgatagaagtgacgtcacagcgagaaaag
aagaagaagaagaagaaacagacgtctgtcaccacagaaagcccacaggtttctacagaa
acacaggtcaccaccaccaaggagaagagaaacgatggaggcaagaacaagatgaaggaa
ctggagaaaacgtcgtccagcaacgaagatgagaacaggagcagattagaatcgttggac
tggaaactcgtcgaggagctggaggagtttattccaggagtgaagaacaaatctgtgtcg
ttcatcaggatactgctgcgagacgacctgcatcgcttcaggagcttcagacagcaaggt
attgctctgcgtcgggggcggttcagtatggaggagaatcgacgaatcatatcgaacgtt
tcagacttcctggctctgacgggcatcaagtcagctgttgacctgttccctcagctgtcc
agagagacgagcaccttcaccaggaagatgaggaagacgtaccactttcaggagagactc
gcagagggaattcctcgtccagtgagtgttgtttacactcgggccttaaagctcctggat
gacatcaatcgggtgggcaggttctctaaggaggaggtggagtgtctcaaaaagctccag
cggatccacggcaacaactgggctacgatttccaagaagatggaccgcagcaaccattct
ctgcagaaacgcttctccaccctcgattcaaatcatggctactggaccgaggaggaggag
ctacggctgaagcgggcggtcaaggactactatgagactcagatccagcaggacccgccg
ggatctggtctgagccgaaaccagctcttcaacaacctgccctggaagcccatcagcgag
aaggtccagacccggtcctggctccaatgtcgcaagaagtggttcaacatcctgaaggac
cgtttgacgacagatgggtcggtcttcagcagaggagaggagaactgccaggctaagatc
tgcctcatcaacacgctgtacgacatgtgtgtggaggaccccgctgacattgattgggat
gaagttgcacgtactgttggtcaagtgactcccatgtgcgtacagaaggccttcaacagg
ctgaaagttaataaggttccaaactggacccgcttatcatacgacgagatcatctccttc
atgaagctccacgtggttccgtacctgatgagcagagtgaagtcagaggccaggtgggcg
gagcgacgggaacagtacggggaggacaggtacgacctggcacagattttcgacggcgac
gacttggacggcagttga
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