Austrofundulus limnaeus (annual killifish): 106532163
Help
Entry
106532163 CDS
T06063
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alim04990
]
106532163 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
alim04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
106532163 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
NACHT
AAA_16
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
DUF4062
NPHP3_N
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
AAA_22
NPHP3
KNTC1_N
APAF1_C
Y_phosphatase
PEP5_VPS11_N
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
106532163
NCBI-ProteinID:
XP_013883631
UniProt:
A0A2I4CUG6
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MAAAGDVDLQDVLMRHRDEAPRMKSNMIRVFLSSTFSDMSSERKILLEKAYPEVQSFCXG
LGLVFEVVDLRWGLRSVSFGDHEDWEVSLHEIRTCQRVSAGPAFVGLLGNRYGSRDLPRL
VPEGQFEILLSKLSKNPEGLKQLQRWFLKDHNAVPPTYXLQPITAHFPHFCDLRPEDKTL
QDNSRLSWXLTETQLTQLLRSAAADAEEDGDMTSEETRVFYTSVTEKEFEDGLWTGDCES
PLLFIRESPRQKIRDGPKRLTRLMDTTFDGLLDAEAQELLSKLKTRVSEGSRVLSLHCVD
LSRGNVDPKRREHAQYLDRLCQQFVSQIKEQIQAVIGPLEGKRKIRGRGEEEEEQVVEEA
RQHAIMSAHRSRGFHGREGLLGRICLAMWESTAGRHGPVVVHGAAGMGKTALLCKLVQEM
QGVLESRAVPVIRLLAARHPQRPDIDDVLRSVCLQICLARGLAPPPSLMDHLELLRFFRN
LLEDVSGQDTTLLIVLDSLDQLSDRHQAHSLRWLPADVPPNVHLLVSMETSSEALANMRL
KLGSMQGCFEVDRXSRQEGEDIMASYLQASQRTLTSEQKEAVLQSFLSTGSPAHLKLILS
VAKRWSSFTPPTQLLLGASAQEVTSQLLLRLEAKHGRELVGGALGYIALAREGLLEVELR
DVLSLDDDVISEVYRYSLPPIPSLIRLPPILWARLRRDLQDQLEERWTYGVATLTFSSRI
FSEAVSTHYLTSERRGRSHRILAEYFSGRWSGKLKPASLPGLTLLLSDRKAPPQPLWLAP
GLANIRKLQELTYHLLHAGLWEELRQEVIGNAEWLYCQAQVLGVSSVIYDLDRCSKYMDC
FETGLIQDTLVLMKPSLDFLHGHMDESVFYSELLARLSSLSSSCPAVIRQLCSQCENQLQ
TSPEPVLIPKNSFLQQPGGALQHTLSAPHGGLVCVDVSAVVQLLVSGSDDGVVAVWSLVD
HQLLHTLLGHTALIFSVKINESSSHCLSLAADGSLRRWSLTSGQQLLCVLEAVSINSAPS
AVHLIESEQVMVVHTWTQVKVWSLDGTEIPDSGEESSVVLGVLGDSVVSLWDSVQVRICD
LVNRNQSVEIQLEEPAKNLSPLSSVTLPKHDKVLVVSEEGFIHQISRSGKQTMAVFPLCP
SLFSVTEDETVLLAGSERTLSLFHINTDSVDGFLDLQHEDVVLSACVSSDGKRLVSGAAD
QLVRIWSLTTGALLDSLCGCNAPVTSVFFYQQLVISASTAEASIQLWNLDYDTSHKPTAR
IPAGSAHTAITRDGDQVFYVQQQSQREVLSWSSTTGSVSDRLAVSAEVSCLELAQHKRLL
LCGLTSGTVLIYPLNLPQETLCIPPPESRSRVLCLAVSSEERHLAVAYEDSVCLFEMTTR
DSFPTVEGPLRRTALSLLHAPLSSMALLPDRRLLYGTVCGAVQLQDLVSGEGSELQPHCS
RVSCVTASNWGAHALVGSEDAVQRVWSLNPLVLXHTMEYKCLFFEGVLCAAFSDSDQFVF
TGSLDRTIRVWDVDSGKLLFVQFVYSPVVRMLPFRNGFVGLSRLGSVIRETFRCPNHISP
DYNPLRNVKAQYRVTSRAKDRDGQQTCVSDLRDFNPAQFNLNLMSPFRTKSSSSCVLL
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgggagacgtggacctgcaggacgtcctgatgagacaccgtgatgaagct
ccgaggatgaagagcaacatgatcagagtcttcctcagctccacgttctcagatatgagc
agcgagaggaagatcctgctggagaaggcgtacccagaagtccagtccttctgcygcggt
ctgggtctggtctttgaggtggtggacctgcgctgggggcttcgaagcgtctcgtttgga
gaccacgaggactgggaggtctccctgcacgagatccggacctgtcagagggtttcagct
ggaccggccttcgtcggcctcctggggaaccggtacggctccagggatcttcctcgtctc
gtcccggagggacagtttgagattcttctgtccaaactgtccaaaaaccccgaaggactc
aagcagctgcagcgctggttcctgaaggaccacaacgctgtcccgcccacctacrtcctc
cagccaatcacagctcacttcccccacttctgtgaccttcgacctgaggacaaaacgctg
caggacaacagccgtctgtcctggcrtctcacagagactcagctgacacagcttcttcgc
tccgcagctgctgacgccgaggaggacggagacatgacctctgaggagacacgagtcttc
tacacatcagtcacagagaaggagtttgaggacggtttgtggacgggggactgcgagtcg
cctctactcttcatccgagagagtccccggcagaagattagggatggacccaaacgtctc
accaggttaatggacacgacgtttgatggtcttctggacgctgaggcccaggagcttctg
tccaagctgaagacccgggtctctgaggggtctcgggtcctgagcctgcactgtgtggac
ctgagcagagggaacgtggacccgaagcggcgggagcacgctcagtacctggacagactc
tgtcagcagtttgtctcacagatcaaagagcagatccaggctgtgattggtccattggag
gggaagaggaagatcagaggaagaggtgaggaagaggaggagcaggtggttgaagaggcg
aggcagcacgccatcatgagcgcccaccggagtcgagggttccacggcagagagggactc
ctgggtaggatctgcctggccatgtgggagtccaccgcaggccgccacggtccggtggtg
gtccacggcgccgcggggatgggaaagaccgccctgctctgtaaactggtgcaggagatg
cagggggtcctggagtccagggcagtgccggtgatcaggctgctggcggctcgtcatcct
cagagaccagacattgacgatgtccttcgcagcgtctgcctgcagatctgtctggcacgt
ggtctggctccgcccccttctctgatggatcacctggagctgctgcggttcttcaggaac
ctgctggaggacgtctctgggcaggacaccactctgctcatcgtcctggactctctggac
cagctctcagaccgacatcaggcccacagtctgcgctggctgccggccgacgtccccccc
aaygtccacctgctggtatccatggagaccagcagcgaggcgttggccaacatgaggctg
aagctgggctccatgcagggctgcttcgaggtggaccgtttktcccgtcaggaaggtgag
gacatcatggcgtcgtacctgcaagcrtctcagaggactttaacctccgagcagaaagag
gccgtgctgcagagcttcctgtccaccggaagtcccgcccacctgaaactcatcctgtct
gtcgccaaacgctggagctccttcaccccgcccacccagctgctgctgggcgccagcgca
caggaagtgacatcgcagctcctgctgaggctggaggctaaacatgggagggagctggtg
ggcggagctctgggttacatmgctttagccagggaaggcctgctggaggtggagctacgt
gatgtcctgtccctggatgatgatgtcatcagcgaggtstacagatactccctccctcca
atcccctccctgatacggctgccccccatcctgtgggcccggctcagacgggacctccag
gaccagctggaggaacgctggacttatggagtcgctaccctcaccttcagcagccggatc
ttctctgaggcagtctccacccactacctgacctcagagcgccgggggcggagtcacagg
atcctggctgagtacttctcaggtcggtggtctgggaaactgaagccagcatctctacca
ggtctgactctgctgctgtctgacagaaaggccccgccccagccgttgtggcttgctccc
ggattggctaacatcaggaagctccaggagctgacctatcacctgctgcatgccggcctg
tgggaggagctacgacaggaagttataggcaatgctgagtggttgtactgtcaggcccag
gtccttggggtttccagtgtgatctacgatctggaccggtgttccaagtacatggactgc
tttgaaactggactgatccaggacactctggttctgatgaagcccagcctggacttcctg
catggtcacatggacgagtctgtgttttactcggagctgctggcccgcctgtcctctctg
tcctcctcctgtcccgctgtcattcgtcagctgtgcagccagtgtgagaaccagctccag
accagtccagaaccggttctgatcccaaagaacagcttcctgcagcagccagggggsgcc
ctacagcacacgctgtctgctccgcatggaggtctggtttgtgtggatgtcagcgctgta
gtccagctgctggtttcaggttctgatgatggcgtggtggcggtctggagcctcgtggac
catcagctcctgcacactctgctgggacatacagctttgattttctctgtgaagatcaat
gaaagctcctcccactgcctctcattggctgctgatggctctctgaggaggtggagccta
acaagtggccaacagttgctctgcgtcctggaggcagtgtctattaactcagccccctca
gctgttcacctgattgagtcagagcaggtgatggtggttcacacttggacacaggtgaag
gtttggagtctggatgggactgagatcccagacagcggtgaggagtcctcagtggtcctg
ggagttctgggggactctgtggtgtccctttgggactctgttcaagtcagaatctgtgac
ctggtgaacagaaaccaaagtgtggagattcagctggaggaaccggcaaagaatctgagt
ccactgagctctgtgacattacccaaacatgacaaagtgttggtggtgtcagaggagggg
ttcatccaccagatctccaggtcaggtaaacaaacgatggcagtgtttcctttgtgtcca
tctttgttttctgttactgaagatgaaaccgtcctgctggcaggcagcgagcggactctg
agcctattccacatcaacacggattctgtggacgggttccttgacctgcagcatgaggac
gtggttctgtctgcctgtgtgtcttcagacggtaaacgtctggtctctggagcagcagac
cagctggtccggatctggtccctgaccaccggagccctgctggactccctgtgtgggtgc
aacgctccagtgacctcggtcttcttctaccagcagctggtgatctcagcctcgactgct
gaggcttccatccagctgtggaacctggactacgacaccagccacaaacccacrgcccgc
atcccagctggctccgcccacaccgccatcaccagagacggagatcaagtcttctacgtc
cagcagcagagccagagggaggtcctcagctggagcagcaccacgggttctgtgtcggac
cgtttggcggtctcagcggaggtctcctgcctggaattggcacagcacaaacgtctgctg
ctctgtggtctgaccagcgggaccgtcctcatctaccccctgaacctcccccaagagacc
ctgtgcatcccgccccccgagagccggtcccgggtcctgtgcctggcggtcagctctgag
gagaggcacctggcggtggcctacgaggactcggtgtgtctgttcgagatgaccaccaga
gacagcttccccacggtggagggacccctgaggaggaccgcgctgtctctcctccatgcc
cccctgtcctccatggccctgctgccagaccgccggctcctgtacgggaccgtctgcggg
gcggtgcagctgcaggacttggtcagcggggaggggtctgagctgcagcctcactgcagc
agagtctcctgcgtgacagccagcaactggggggctcacgccctggtggggtctgaggac
gccgtgcagagagtgtggtccctgaacccactggtcctggmccacaccatggagtacaag
tgtctgttcttcgagggggtcctctgcgctgccttctccgacagcgaccagttcgtcttc
accggatctttagacaggaccatcagagtctgggacgtggactccgggaagctgctgttc
gttcagttcgtctactctccggtggtccggatgctgcccttcaggaatggttttgtgggt
ctgtcccggctgggttctgtcatcagggagaccttccgctgtccgaaccacatcagtccg
gactacaaccctctgagaaacgtcaaggcccagtaccgggtcacctccagggccaaggac
cgggacggacagcagacctgcgtgtcggacctgcgggacttcaacccggcccagttcaac
ctgaacctgatgagtccattcagaaccaagtcgtcctcctcgtgtgttctgctgtag
DBGET
integrated database retrieval system
