Austrofundulus limnaeus (annual killifish): 106532239
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Entry
106532239 CDS
T06063
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03266
Virion - Herpesvirus
alim04145
Phagosome
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04517
IgSF CAM signaling
alim04518
Integrin signaling
alim04810
Regulation of actin cytoskeleton
alim04820
Cytoskeleton in muscle cells
alim05100
Bacterial invasion of epithelial cells
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
106532239
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106532239
04517 IgSF CAM signaling
106532239
04518 Integrin signaling
106532239
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106532239
09144 Cellular community - eukaryotes
04510 Focal adhesion
106532239
09142 Cell motility
04820 Cytoskeleton in muscle cells
106532239
04810 Regulation of actin cytoskeleton
106532239
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106532239
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106532239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106532239
04515 Cell adhesion molecules [BR:
alim04515
]
106532239
04090 CD molecules [BR:
alim04090
]
106532239
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106532239
Cell adhesion molecules [BR:
alim04515
]
Integrins
Integrin alpha subunits
106532239
CD molecules [BR:
alim04090
]
Proteins
106532239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
106532239
NCBI-ProteinID:
XP_013883717
UniProt:
A0A2I4CUQ5
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MGAAPGPPAPQRLLPGLALILRLCAAFNLDADTRVVFTGPRGSYFGYSVEFFGKSNSISI
LIGAPKSNTSQLNVTEGGAVYLCPWSQSNCSIINFDKQGDRYFYINDVNTQVEFKSHQWF
GATVRSHGNSILACAPRYYWRTEHEIPFSDVTGTCYLSVDSLKTFVEFAPCRTERHGPAG
QGYCQGGFSIDFTKDGRVVLGGPGSFYWQGQLISAATEEIVKAYYPSYFLLSVTGQIQTQ
QVQGSYDDSYLGYSVSTGEFSGDGQEDFITGVPKGLMLHGLVTVLSGRDLKSVLNLTGEQ
MGSYFGYSVVVTDINNDGLDDVAVGAPMFLSRGSDGRLEELGKVYVYLQRGPLQLEPSQD
HLLGSQAFGRFGTSLAPLGDLDQDGFKDMAVGCPYGGGDQQGLVFIYNGHAGGLNHAPTQ
TLSGQWAVSSFPSGFGFAMRGDKDLDQNGYPDLIVGAFGSDKAALYRARPIVNASASLTV
QPAMFNQEEKTCFLIKGNETISVSCISISFCLLAHGKHLPNHLVFGVEVQLDSVKQNQKD
SVRRALFLQSQQPGLVTTFNLTNGESLCHDTKIYLRAEEEFRDKLSPIYISLNFSLDPQA
PPDQHGLRPILSHQTEQRVQQKAQIQLDCGEDNVCVPDLKLEVYGDRAEVYLGDENTLSL
TFNARNEGEGGAYEAELYVALPPEADYSGIARSNMSLTQLTCSYEADNQTRYVLCDLGNP
LKPSTSVWAGLRFTVPRLEDSQSSVQFELQIQSKNANNSESEVVLYELEVAAMADVILQG
VSRPNEIIFPPPNFTVHQSLXEEQDVGPELQQVFELVNNGPSSVSQSTLQVKCPLRAHSH
SLLYPVEMVAEGPLSCSSRTRFNALRLRLQPPETKAPASLKSRSEHHMWRREEHQQPLTG
QGNLTCSAVECWELQCNVGLLQRGGSVILSVRSRLWAETFITRPYERYILECLVHYKVNR
MPYTIPPKFKPSGSTKVVVAVTWSKPDGPSSVPVWIIILAVLAGLLLLALLIYLLYKMGF
FKRSDPYGTTMEKAQLKPQASSEA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgctcctggacctccagccccgcagcggctcctgcccggactggcgctgatc
ctgcggctgtgcgcagccttcaacctggacgcggacacgcgygtggttttcacgggaccg
cgcgggagttatttcggttactcggtggagttcttcgggaagtccaacagtatcagtatt
ttgatcggtgctcctaaatccaacaccagccagctgaacgtcacagaaggaggagcggtc
tacttgtgtccctggagccaaagtaactgcagcatcatcaacttcgacaaacaaggtgat
cgatatttttacatcaatgatgtgaacactcaagttgagttcaaatcccaccagtggttt
ggagctactgtgcgttcccatggcaacagcatcttggcttgtgcgcccaggtattactgg
aggacagaacacgagatccccttttctgatgtcacaggaacctgttatctttctgttgac
agcctcaaaacctttgtggagtttgccccgtgccgaacagaacgacatggacctgctgga
cagggctattgtcagggtggattcagcattgacttcaccaaggatgggagagttgtcctc
ggtggacctggcagcttctactggcaaggtcagctgatttcagcagccacagaggagatt
gttaaagcctactatccctcctacttcctgctgtcagtcactgggcagattcagacacag
caggtgcaggggagctatgatgacagttatctgggttattctgtgagcaccggggaattc
agcggggacgggcaggaagatttcatcacaggagttcctaaaggactcatgctgcatggt
ttagtgaccgttctgagtgggagggatctgaagtctgtgttgaacctgacgggggagcag
atgggatcttactttggctactcagtggtggtcactgacatcaacaacgatggtttggat
gacgttgctgtgggagctccgatgtttcttagtcgtgggtctgacgggcgtctggaggag
ctgggtaaggtgtatgtgtacctgcagaggggccctttgcagcttgagcccagccaggac
cacctcctcggctcacaggctttcggacgattcggcacctctctggctccgctgggagat
ctggaccaggatggattcaaagacatggctgttggctgtccctacggaggaggagaccag
cagggtttggtcttcatctataacggtcatgcaggaggactgaaccacgcacccacccag
acactttccggccaatgggctgtgagctcttttccttctggttttggctttgccatgagg
ggggacaaagatctggaccagaacgggtacccagatctgattgttggtgcttttgggtca
gataaggctgcactgtacagggctcgaccaatagtgaatgccagcgcgtctctgactgtg
cagccagccatgtttaaccaggaggagaaaacatgttttctcatcaaagggaatgaaacc
atttccgtgtcttgcatcagcatcagtttctgcctcctggctcatgggaagcacctcccc
aatcatctagtctttggggtggaggtgcagttggacagcgtgaagcagaaccaaaaggat
tctgtcaggagggccctgttcttgcagagtcagcagcccggtctggtgacgacctttaac
ctgacaaatggtgaaagcttgtgtcatgacaccaagatctacctgcgggctgaagaagag
tttcgggataaactctcacccatctacattagcttgaacttcagtctggaccctcaggcc
ccaccagaccaacatggcctccgccccatcctgagccaccaracagaacaacgtgtgcag
cagaaggcccagattcagctggactgtggagaggacaacgtctgcgttcctgatctgaaa
ctggaggtttatggtgacagagctgaggtttacctgggcgatgagaacaccctgagcttg
acctttaatgccaggaacgagggagagggcggagcttatgaggctgagctctacgtggcg
ctgccccctgaggctgactacagtgggatagctcgcagcaacatgagcttgactcagcta
acgtgcagctatgaagccgataatcagacccgctatgttctgtgtgatctgggaaacccc
ttaaagcccagtaccagcgtatgggctggccttcggttcaccgtaccaagactggaggat
tctcagagttctgtccagtttgagctccaaatccagagtaaaaatgctaataactcagag
agtgaagtggtgctgtatgagctggaggtggctgccatggctgatgtcatcctgcagggt
gtttctcggcccaatgaaatcatcttccctccacccaactttacggttcatcagagtctg
rcagaggaacaagatgttggtccagagcttcagcaggtttttgagctagtgaataatggt
cccagttcagtgagccagtcaacactacaagtcaaatgtcccctgagggcccacagccac
agtctgctttaccctgtggaaatggtggctgagggtccgctcagctgctcgtccagaaca
cgcttcaatgcactcagactcaggctgcagcctccagaaacaaaggctcctgcrtcatta
aagtccagatctgagcatcacatgtggaggagggaggaacaccaacagcctctgactgga
caaggaaacctgacgtgcagtgctgtggaatgctgggagctgcagtgtaacgtgggtctg
ctgcagagaggaggcagcgtcatcctgagtgtacgctccagactgtgggctgaaaccttc
atcacacggccctatgagcgctacatcctggartgtttggttcactacaaggtgaacaga
atgccatacactattcctcctaaattcaagccatctggatcaacaaaggtggtggtcgct
gtgacctggagtaaaccagatggtccatcctcagttccagtgtggatcatcatcctggct
gttctagctgggctgcttttactggctctgcttatatatctgttgtataagatgggcttc
tttaaaaggtctgatccatacggtaccaccatggagaaggcgcagctcaaaccacaggcg
tcctctgaagcttag
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integrated database retrieval system
