Austrofundulus limnaeus (annual killifish): 106532368
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Entry
106532368 CDS
T06063
Symbol
gigyf1
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106532368 (gigyf1)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106532368 (gigyf1)
Surveillance factors
Other surveillance factors
106532368 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
106532368
NCBI-ProteinID:
XP_013883863
UniProt:
A0A2I4CV41
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSAAVLRLVGKGVGGPAPAGVVRGRG
AARGGRGRGRGEGGFYQRSIEDTELGFGRSVREIHRSQSWDDRGERRFEKPLRREAVRPG
FEETGGPGAPGRKEYTRADSDNWRTLREEQEEEEGEPGSNWRLTGSRRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSEGHGPGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPMKKGGKETILEEDLDFQGIEEEEEEEENLPNVERKSSEGDRESKDAVSSAGDEKIK
PASPSSSSPPAHCAPPSLDLGLVGQVMENSHLSNSHCVKPSSSPADDLAPIGSSKAQLSP
TTPTPAAAAAASSSSLPPPPSSSAAPLLPPSGGDTEDDEGMKHLQQEAEKMVASLQDTSL
EEECFTQALQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTM
TLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLMRQLPPTQRSQPSRGPTGTGNLE
QERLKKQQQQELAAAALYQQLQQQQLFQLMNRCSEQGIMPSMNRSMSVPDTGSMWDMHTS
ASQPSGSEASLWDLMNPSTQGPALEQLQKLQQERRDAELRAKREEEEQRKRREEKRRQQE
EQKRREEEEMFRRKQCRQQQELIMKLLQQAPQQQGPGASGSSWSSASSSGLPKSAKSLTL
LEMQQQRAQQQRHAGMSMGSSSMGGQWSEGIGMWGSMEGKGGSGGSSSSMGMWDEPVKNQ
SGLRGNTNNNLGLKNSRSSPSLSDQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWCEQML
HALNTSANNSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAKQK
ANQQRQQQQQLSKEVGGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKASLYDNQGGKMKK
KQPMMLHPDPSILGYSFHNPGECLSMNELEMVEDY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattttgcaagatgagcccatgcagccgcttgcgctggtg
cctctcaccgaggaggagcagagaaacttctccatgtccgtgaacagcgcggcggtgctg
aggctcgtgggaaagggagtaggtgggcctgcaccagccggggtcgtccgtggacgaggg
gccgcgcgaggtggccgaggccgaggccgtggcgaaggtggattctaccaaagaagtatt
gaggacactgaactggggttcggtcgcagcgtccgagagatacaccgcagccagagctgg
gacgaccggggtgaacgtcgattcgagaagccgctgcggcgggaggcggtgcgtcccggc
tttgaagaaaccggaggtcccggggctcccgggaggaaggagtacacaagggctgacagc
gataactggcgcaccctccgcgaggagcaggaggaggaggagggggagccaggcagcaac
tggagactcactggatcccgcagggatgatggtggtcctcgctcagcgggctggcgggac
cacagcggtccaggtgaaggtcgccgcaggaagttcgacttcgacttccgggactcggag
ggccacggtcccggccgccggcgcgcggggagcgaggggctggaggacgacagggacggc
ctgccggagtggtgcacagatgaggaggatggagagatgggaacctttgactcctctgga
gccttcatgcctatgaagaagggcgggaaggagacaatcctggaggaggacctggacttc
cagggcatcgaggaggaggaggaagaggaagaaaacctccctaatgtagagaggaagagc
tctgaaggagacagggagagtaaagatgccgtgtcttctgcaggggatgagaaaataaag
ccagcatcaccctcctcttcctctcctccagcccactgtgcccctccttcactggatctt
ggacttgttggtcaggtgatggagaactctcacctgagcaacagccactgtgtgaagccc
agcagctcacctgcagatgacttggctcccattgggagctccaaggcccagctgagcccc
accacccccacccccgctgctgctgccgccgcctcctcctccagcctacctcccccaccc
tcttcctctgctgctcctctcctccctccttcaggaggagatactgaggatgatgaaggc
atgaagcacctgcaacaggaggcagagaagatggtggcgtccctgcaggacacctccttg
gaggaggagtgtttcacccaggctctgcagcagcaggagagcaggaacacagctgctgcg
ctgccgctatctcacgaggctgctatgaagtggttctacaaagaccctcagggcgagatc
cagggtccgttcaccacggttgagatgtgcgagtggttccaggccggctacttcaccatg
accctgctggtgaagcggggctgtgacgagggctttcagcccctgggggacgtcatcaag
atgtggggccgtgtgcccttcgccccaggaccctcgccgccgcccctgctgatgagacag
ctcccaccaacgcagcgctcgcagcccagccgggggcccaccgggactggaaacctggag
caggagcgtctgaagaagcagcagcagcaggagctggcggccgcagctctttatcagcag
ctccagcagcagcagctattccagctcatgaacaggtgcagtgagcagggtataatgcct
tcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctca
gcctcacagccgtcaggcagtgaggccagtctttgggacttaatgaatccttctactcag
ggtccagctcttgaacagcttcagaagctccagcaggagaggcgagacgctgaactcagg
gcgaagcgcgaggaggaggagcagcgtaagaggagggaggagaagaggaggcagcaggag
gagcagaaacggagggaggaggaggagatgttcagacgcaagcagtgtcgtcagcagcag
gaactgatcatgaaactgctgcagcaggccccccagcagcaggggccgggggccagcggc
tccagttggagcagtgcttcttcatccgggctaccaaagtcagcgaagtctctgactctg
ctggagatgcagcagcagagggcccagcagcagagacacgccggcatgtccatggggagc
tcctccatgggcgggcagtggtcggagggcatcggcatgtggggtagcatggagggcaag
ggtgggagcggcggctcctccagcagcatggggatgtgggacgagcccgtgaagaaccag
agcggcctgcgcgggaacaccaacaacaacctgggcttaaagaacagccgcagcagcccc
tccctcagcgatcagtacatgatgcgtcgtaaacggacggaggaagaggagaagctgctg
aagctgctgcagggcatgaagcctcaggacggcttcaccacctggtgtgaacagatgctg
cacgctctcaacacctctgccaacaactcctcctctctggatgttgccaccatcgtggca
tacctgaaagaggtggagtctccctatgcagtgctggatttcatccggtcctaccttggg
gacactgtggaagccaaagagttcgccaaacagtttcttgagcgacgtgccaaacagaaa
gccaaccaacagaggcagcagcagcagcagttatcaaaggaggtgggtggattgaacatg
aacttccctctgcaggactcgatgcgaggtatgaatccgagcactctgcagtccatgttt
caggccaaccacatgggcaaagccagtctctacgacaaccaggggggaaagatgaagaag
aaacagcccatgatgctgcaccctgaccccagcatcttagggtactcattccacaacccg
ggcgaatgtctgagcatgaatgagctggagatggtggaggattactga
DBGET
integrated database retrieval system
