Austrofundulus limnaeus (annual killifish): 106532566
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Entry
106532566 CDS
T06063
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alim03009
]
106532566 (ddx54)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106532566 (ddx54)
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
Pre-60S particles
Helicases
106532566 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
DNA_pol3_chi
CMS1
Motif
Other DBs
NCBI-GeneID:
106532566
NCBI-ProteinID:
XP_013884115
UniProt:
A0A2I4CVV7
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAQRKKKLKKRRHTAANRQEPQSDSDGRDFELAAEIKNDDSPWRKLSRFPAASDCLSDVE
PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTVPVILDGKDVVA
MARTGSGKTAAFLLPMFEKLKAPQAQTGARALILTPTRELALQTMKFTRELGKYTGLKTA
LILGGDRMEDQFAALHENPDIIIGTPGRLMHVITDMNLKLHSVEYVVFDEADRLFEMGFA
EQLQEIICRLPDTRQTLLFSATLPKLLVDFARAGLTEPVLIRLDVDSKLSDQIKLAFFHL
RVDDKPALLLHLLRNVVKPQEQTVVFAATKHHVEYLKELLSTENIECAYIYSALDQTARK
INIGKFVNRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGMA
YSMICPDEMPFVYDLHLFLGRPVEFATAGHTPDSGGVFGRVPQSILDDEGSHLIVTHENS
LDLENLQRVSENAYKQYLKSRPSPSSESIRRVKNTEMASMAVHPLLGSGFEKKELERLQM
VDAIKGYKSKATIFEINSSNKTPASEVMRTKRSKDMPLVDKFSKKREELCAESKQQRSVR
SASAADYEMRYSGGEEEEEDLKGVFSKVVGVKRKNPTDYGEERSKNKRSRQTGKDEEYFI
PYRPKDFDSERGLSLGGDGGNFEQQASSAVLDLMGDDGDRLNQHKALMKWDRKKKRFVRE
SGKEDKKKIKTESGQTVGNKNRKNFYEEWKKKYKVDDAESGSDGETGGGRMKSAGGRGRG
RRGPNPRSPAGPPVKPGGHRVRSELKSSAQILKRRKQQQKQQFRQKGGMKNIRSKNKQWV
GEVKKSGFGRGGHKKGKMRKKL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagagaaagaagaaactgaagaagaggagacacacagcggccaacaggcaggag
ccgcagtcggactctgacggcagagatttcgagctagctgcggaaatcaaaaacgatgat
tctccatggaggaagctgtcacggtttcctgcagcatcagattgcctgtcagatgtggag
cctgacaccagggagatggtcagagctcaaaacaagaagaagaagaagtctggggggttt
cagtctatgggtcttagctatccagtttttaaggggatcatgaaaaaaggctacaaagtc
cccacacccattcaaagaaagactgttcctgtgatcctggatggaaaggatgttgtagct
atggctcggacaggcagtggtaagacggctgcgtttctgctgcccatgtttgagaagctg
aaagctcctcaagcccagacaggagccagagccctcatcctgacccccaccagagagttg
gccctacagaccatgaagttcacaagagagttaggaaaatacaccggtctgaagactgct
ttgattcttggtggagacagaatggaagatcagtttgctgctcttcatgaaaaccctgac
ataatcattggtacccccggtcgtctcatgcacgtcatcacggacatgaatctgaagctg
cacagtgttgaatacgtggtgtttgatgaggcagacaggttgtttgaaatgggttttgcc
gagcagcttcaggaaatcatttgtagacttcccgacaccagacagactctgctcttctct
gctactcttcccaaactgttggtagactttgccagagctggcctgacagaacctgttctg
attcgcttggatgttgattcaaaactcagtgaccagattaagctcgcgttctttcacctt
cgcgtggacgataaaccagcgctgctgcttcatctgctgaggaacgtggtgaagcctcag
gagcagacggtggtctttgctgccaccaaacaccatgtcgagtaccttaaggagctgctg
tctacagaaaacatagagtgtgcctacatctacagtgccctggatcagaccgccagaaag
atcaacattgggaaatttgtgaaccggaaagccatggtgcttattgtgaccgatgtcgct
gctcgtggtatcgacatccccctgctggataatgttattaactacaacttcccctccaag
gcaaagctctttttacacagagtcggccgtgtggggcgagcggggcgcagcggtatggcg
tacagcatgatttgtccagatgagatgccttttgtttatgatctccacctgttcctcgga
aggcccgttgagtttgctacagctggtcacacaccagattcaggcggtgtgtttggtaga
gttcctcaaagcattttggacgatgaaggctctcatctgatcgtgactcatgaaaactcg
ctggacttggagaatctccagcgtgtctctgaaaacgcttacaaacagtacctcaagtcc
agacccagtccctcgtcagagtccatcagacgggtcaaaaacacagaaatggccagcatg
gcggtccatccattactcggttctggttttgagaaaaaggaactggagcgtcttcaaatg
gttgatgccataaaaggctataaatccaaagcaactatttttgaaatcaactctagcaat
aaaacacctgcaagtgaggtgatgaggaccaaacgctctaaagacatgccattagtagac
aaattcagtaagaaaagagaagagctgtgtgcagagagcaagcagcagcgctccgtcaga
tccgcctcggctgctgattatgagatgaggtacagcggcggtgaggaggaggaagaggat
ctgaagggggtgttctccaaggtagttggtgttaagagaaagaacccaacagattacgga
gaggaacgttctaaaaacaagagaagcaggcaaacgggcaaagatgaagagtattttatc
ccgtacagaccgaaagactttgactcagagagagggttaagtcttggtggggacggcggt
aattttgaacagcaagcctcctcagctgtcctggacctcatgggagatgatggagaccgg
ttaaatcagcacaaagcactaatgaaatgggaccggaagaagaagcgctttgtgagagaa
tcaggaaaggaggacaagaaaaagatcaaaactgagagcgggcagactgtcggcaacaag
aacaggaagaacttttatgaggagtggaagaagaaatacaaagttgatgatgctgaatct
ggatcagatggagaaacaggaggaggaaggatgaagtcagcaggaggtcggggtcgtggt
cgtcgaggccccaacccccgcagtcctgcaggaccaccggtgaaacccggcggccacaga
gtacgctccgagctcaagtccagcgcgcagatcttgaagcgccgcaagcagcagcaaaag
caacaattccgtcagaaaggagggatgaagaacattcgctcgaagaacaagcagtgggtt
ggagaggtgaagaagtcgggcttcggacgcggcggccataagaaggggaagatgaggaag
aaactgtga
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