Austrofundulus limnaeus (annual killifish): 106532752
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Entry
106532752 CDS
T06063
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106532752 (vps50)
Membrane trafficking [BR:
alim04131
]
Protein recycling
Others
EARP complex
106532752 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
106532752
NCBI-ProteinID:
XP_013884330
UniProt:
A0A2I4CWH8
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMSDLSPVENLRIPSKEELRELRQHPIDPQAEQEIINSIEEI
YFSGDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKEXE
RVTALQTNLQLAAVICTNARRQLRGAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDILHYTKVQRAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITIESYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKQDAAPTPDD
AAAESDELSVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIA
QLHEFKFMGQCHSPSISPSRQSVSSTVPPQEELSLFQLYLQDGNPFEMHIDHKEEETEDV
LASNGYESDELEKSVYQDYDSDSDVPDELKQDYVDEQTGDTPLKSVSKETIRSKKKSDYN
LSKASAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPNYGSREAATTRVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMDPVGEN
AGVHGPAEDRKEKVPSPHLSQLVVLTSSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQH
NVYVDILLKEFEQFNKRLSDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKKARQKLLAAIDDIERPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgtcagggcctgaaaagtccccaagagagcatg
tcagacctgagtcctgtggagaacctgaggatcccaagcaaggaggagttgcgggagctg
aggcagcatcccatcgacccccaagcagagcaggagatcatcaacagcatcgaggagatc
tacttctccggcgactccttcgacatggtgcaacatgaactggagaagctccctcctgag
ctcaacctgcaggagctggaggagtacagagacaagctgaagagacaacaggctgcagtt
tccaaaaaggtcgctgatctcattctggagaaacagcctgcttatgtcaaggagrtggag
agagtgacggccttgcagaccaacctgcagctggcagcagtcatttgcactaatgcaagg
agacaactacgaggtgcaaaggaggggttcacagaggccagcctgggtctgctagccaat
cagaggaggcgacaactgctgacaggtctgctcaagtctctgaggaccatcaagaccctg
caaagaacagacgtaagactgagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagt
gaactgaattctaaactacaagacactcttgagcagatagaggaacagcttgatgtcgcc
ctgtcaaagacttgtaagcactttgatattttgcactacaccaaggtccagcgggcctac
tcgctcctcggcaaaacacagactgctatggatcagctgcacatgcacttcacccaggcc
atccacaatacggtgttccaagttgtgctgggatacgttgagctgtgtgctgggaacgcc
gacaccaagtttcagaagatgcagtataaagacctttgcacgcatatcaccattgaaagc
tacattccctgcctgacggatctctgcaaggcattgtgggaagtgatgctgagctattac
cgcaccatgcagtggcacgaggagcatgacaaacaggacgccgcacccactcccgatgac
gcagcagcggagtccgatgagttgagtgtggaccgaagctatgtgaagaaaaagctcgag
catgggctcacacggatctggcaggatgtccagctaaaagtgaaggcgtacattcttggt
acagacatgtctaacttcaaatacgatgatttcattgtggtactggatgtcatcagcagg
ttgatgcaggtgggtgaggagttctgtggcagcaagtcagaagtcctgcaggagtccatc
aaacgccagagtgttaactatttcaaaaactatcacagggcacggctggaggagctgagg
atgtttctggaaaatgagacgtgggagctgtgtccagtcaagtctaactttaacattgcc
cagctccatgagttcaagttcatgggccagtgtcactctccgtccatttccccgagcaga
cagtctgtgtcctcgaccgtcccaccccaggaggagttgtccctgtttcagctgtacctt
caggatggaaatccatttgagatgcacattgatcacaaggaggaggagaccgaggatgta
ctcgcatctaatgggtatgagtcggatgagctggagaaaagcgtgtatcaggactacgac
agtgacagcgacgtccccgatgaactaaagcaggactacgtagacgagcagacgggtgac
actcctctaaagagcgtgtccaaagagaccataagaagcaagaagaagtccgactacaac
ctcagtaaggccagcgccccgattctcactaacaccaccctcaacgtcatccgtcttgtc
ggaaagtacatgcagatgatgaacatcctgaagcccattgcctttgatgtcattcactgc
gtatcccaactctttgactattatctttatgctgtctacacattctttggacgaaatgac
atgcctgtcccaagcccatctttgccaaattatggtagcagagaggcagccactaccagg
gtggtgggccctgcctgcttgtatgagtcatcaggtctgggccttatcagcagcagactg
agaaccacactgaaccggatccaggagagcctcattgacatggatcctgttggggaaaat
gccggagtccatggcccggcagaagacaggaaggagaaggtgcccagtcctcatctgagc
cagctggtggtcctcaccagcagtgggactctgtacgggctggcacagagggtggtggcc
acagagtctcttgtgtttttagctgagcagtttgagtccctgcagtcccacttggacaca
atgatgcctgcagctaagaagcctttcctgcaacagttttactcacagacggtttctacg
gccagtgagctgcgtaaaccyatatactggattgttgcagccaaggccatcgactacgaa
cagatgctgctcctgatggccggagttaaatgggacatcaaggagataatgtcgcagcac
aacgtatatgtggacattctgttgaaggagtttgagcagtttaacaagcggctgagtgat
gtttccagacacgtacgcattcctctgcctgtgtccaacgtcctctgggagcactgcatc
cgcctggccaacaggactctcgttgagggctacgctaacgtgaagaaatgtagcaacgag
ggccgcgccttgatgcagctggatttccagcagttcttgatgaagctggagaaactgacg
gacctgcggccgatccccgacaaggagtttgtggaaacctacattaaggcctactacctg
actgagaacgacatggagcagtttatcaagaaccacagggagtactccatgaagcagcta
gccaacttggtgaatgtttgtctgggctcacatatcaacaagaaggctcgtcagaaactt
ctagcggccattgatgacatcgaragacccaagagatag
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