Austrofundulus limnaeus (annual killifish): 106532949
Help
Entry
106532949 CDS
T06063
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106532949
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106532949
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106532949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106532949
NCBI-ProteinID:
XP_013884582
UniProt:
A0A2I4CX67
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MGQEAGRTWTTEEVRVCSRFLEWLNPEPLNPDPDAADVVISPSDPRKSGILVHSTHLLEP
CSSLEDAPITDVLRQVLKTKNYCTLSPSDRYSWPAVARGHNTVIISHNAEQPLSYLAPLL
SHIQLNSIFTSLTYSLGPIAVLLCPGWERAQVVYDLLEESKVSKTLRPVISVLGTGKNEA
KAVKIPKNCLLLVTTPFTLVRLLSCHCFLFLRMCHLILDEAEEIFALGSDQMETVLKHFQ
KVTCSDENVFCPKQLVVVARRWTSHLESLIGNHMPSPYTIISVPEEAALYGNVQQVILMT
VESSKMAALLGVLDFNPVVGQKSLIVTNSAQEVEEVFKAVSNKSAFCLKTHEGLTHQFDF
VMEQWRKDIGSGTQVILVTTNDCLKCLSIRDATCLIHYGFPTSPKVFGSRLFCMAENFRN
LCEGVCSQDQTGHNSQVCRSVLLLSEKNASHVVGVLRYLKRTNALLPPELLAFAQGVQVA
REDQKMDRPLCSYLKSFGFCRDSSVCPDRHQFHSQLDQSVLPSSGVIEVVPLFIKSASVF
SGRMVRKDDKCFNLMASGMASYYADKKPGATELLEGCLYAVQEDDVFHRVKILSIPKCGD
CLFFAVLVDFIDVGKEEEVKSHQILQLPEQFQSLPGQAIEMVICRVKPADAEKDWHPKVT
RAISQKIRGLQHQSRVVLSLGNTVFLDCMVRLTKVPGMKTLINEYNVQSEILNTGMAVSN
PDHLNLLRALCEGDLVNKDTENTSRLEEDSVSVQVKIKTDRAADDTPVSTPDPLLSLKAP
TNHFTVQTPSLSVCESASRQKDISTSELVQSTFTDGGQSSGAGAWQPRLVSVPQGHYISL
PFSSSARDGEECCTSDTAVSLHLLENGLPEDPHHNNTKHVFDHNKDDNSNSTISFHPQVV
WHQTLDSVILTVKLMNPECQLWDFYPDRVVYSGRVNGQIYRADLQLHQKIAADLCHLEMK
SHEPVLKLVKQQQGYWEQLVTTKNIFVRYNMEYIDEDEDKVLNDTVFLEETGENNWYVNS
GSGSESD
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaagcaggcaggacatggacaacggaagaggtccgggtctgttcacgtttt
ttggagtggttgaacccagaacctctcaatcctgatccagatgctgcagatgttgtgatt
agtcccagtgatcccaggaaaagtgggattctggtccactcaacccatctgctggagccc
tgtagtagcttggaagacgctcccatcacagatgttcttcgacaggtgttaaagacaaaa
aattactgcactctgtctccctccgatcgctacagctggccagctgtggctcgtggacac
aacactgtcattatctcccacaatgctgagcagccacttagctacctcgcccccctcctc
tcccacatccagctcaactctatcttcacttccctcacctacagtttagggcccatagct
gtactgctatgtccaggatgggagagggctcaggtggtctacgacctgctggaagaaagc
aaggtctcaaaaactctccgcccagtcatcagtgtgctgggcactggcaagaatgaagca
aaagctgtgaaaattcccaaaaactgcctccttttagtgaccactcccttcactcttgtc
cgtctgctgtcttgtcactgcttcctgttcttacgaatgtgccacctgattctagatgag
gctgaggagatttttgctcttggttctgatcagatggaaaccgtcttgaagcatttccag
aaggtgacttgcagcgatgaaaatgtattctgtcctaagcagcttgttgttgtggcgaga
agatggaccagtcacctagagagtctgataggcaatcacatgccttcaccctacaccatc
ataagtgttcctgaagaagctgctctctatgggaatgttcagcaggttatcctcatgacg
gtggagagtagtaagatggcagcgctgttgggtgtgttggatttcaaccctgtcgttggt
cagaagtcgttgattgtgacaaactctgctcaggaggtggaagaagtgttcaaggctgtt
agcaacaaatcagctttctgtctgaagacccatgaaggactgactcaccagtttgacttt
gtgatggagcaatggaggaaggacattggttcaggcactcaagttattctggtgaccacc
aatgactgtctgaagtgtctcagtatcagagatgcaacttgtctcatccactacgggttt
cccacttctcccaaagtgtttggcagcagacttttctgcatggctgaaaacttcagaaat
ctttgtgaaggagtttgctcccaggatcaaacggggcacaactctcaggtctgcaggtcg
gtcctgctgctttcagagaagaacgcctcccatgttgttggagttctacgctaccttaag
agaactaatgccctgctgccccctgaactcctagcttttgctcagggggttcaagtggcc
cgtgaagaccagaagatggatcgccctctctgcagctacctgaagagctttggattctgc
agagacagcagtgtgtgtcctgatcgccatcaatttcattcccagctggatcagtctgtg
ctcccgtcgtctggagtcattgaggttgtgcctctcttcattaagtcagcctcagtgttt
tctggccgtatggtcaggaaggatgacaaatgttttaatttaatggcctctgggatggct
tcttattacgctgacaagaagccaggagccacggagctgctggaaggatgtttatatgca
gtgcaagaggacgacgtcttccacagggtgaagatcctctccatacctaagtgtggcgac
tgtttgttttttgctgttctcgttgacttcattgatgttggaaaagaggaggaagtgaaa
tctcatcagatccttcagctaccagagcagtttcagtctctgccaggccaagccattgaa
atggtcatctgcagggtgaaaccagctgatgctgagaaggactggcaccccaaggtcacg
agagccatcagccagaagatccgaggtctgcagcatcaatcacgagttgttctaagtctg
ggaaacacggtttttcttgattgtatggttcgattaaccaaggtgccaggtatgaaaact
ttgatcaatgaatacaacgtgcagtctgagattctgaacacagggatggcagtcagcaac
ccagatcatctgaacctactgagagcactgtgtgaaggagatctggtcaacaaagataca
gagaacacatccaggctggaggaggattcagtatctgttcaagtaaagatcaaaacagac
agagctgcagatgacacaccggtgtccacaccagaccctttgctcagtctgaaagctcca
acaaatcatttcactgttcaaactccttcactgtcagtctgtgaatctgccagcagacag
aaagacatcagcacttcagagctcgtgcaaagtacattcactgatggtggtcagagcagt
ggtgccggtgcgtggcagccccgcctcgtcagtgtgccccaggggcactatataagttta
ccatttagttcaagtgccagagatggagaagaatgttgcacaagtgatactgctgtgtct
ctccaccttctggaaaatggtttacctgaagatcctcatcacaacaacacaaagcatgtt
tttgatcataacaaggacgacaacagtaactcaacaataagcttccatcctcaggtggtt
tggcaccagacgctcgactctgtgattctgacagtgaagctgatgaatccagaatgtcaa
ctctgggatttctaccctgacagagtcgtttacagtggcagagtaaacggtcagatctac
agagctgacctgcagcttcaccaaaagatagccgctgacctttgccacctggagatgaaa
tcccacgagccggttctgaaactggtcaaacagcagcagggatactgggaacaactcgtc
accacaaagaatatttttgtaaggtacaacatggagtacattgatgaggatgaagacaaa
gtactaaatgatacggtgtttctggaggaaacaggtgaaaataattggtacgtgaactcg
gggagtggcagtgagagcgactga
DBGET
integrated database retrieval system
