Austrofundulus limnaeus (annual killifish): 106533002
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Entry
106533002 CDS
T06063
Symbol
caprin1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106533002 (caprin1)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106533002 (caprin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
106533002
NCBI-ProteinID:
XP_013884654
UniProt:
A0A2I4CXE0
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MPSAMNANRTVQSASPDMGSAPGLAGNFALGGQSDVMKQVLCVIDKKVRNMEKKKSKLDD
YKVRKNKGEGLNQDQLEALSKYQEVMNNLEFARELQKTFITLGQDLQKVVKKSVRREQLQ
REEAEQRKLKNVLELQFVLDRLGDDAVRQDLKQGVSGSPLLTDADLAAFDEFYKLVGPER
DQNVRMTDQYEEASVHLWELLEGRDKPVVGTTYKALKETLDQVLLSGYFDRIPSHQNGVC
EEEEEEESVPGAAVAAVAESSEAEEQTVDPETEVIEEFTESITVETTEFVNRQFIPDSSY
SGSEKEQGDEWTRETEAVSALQQQQQQQPVQPAAPPVALETHPVTLTSPVPPTDPMVRKQ
VVQDLMAQMKGPYNFMQDSMLDFDGTPIDPAIVSAQPMKPAPTIDVPRLVCSPGHPDPRP
IQSNSVPVQPEPTQVPIVSPTPPQMYQTSHTPDPRPPTESIDPIQTSMSLSSDQPPPSTA
LPPASQTQVFQPVSKVPHSSGINVNAAPFQSMQTVFNLNAPVPPANETEVLNQASQYQNS
YNPAFSSQSQHPVEQPEMQSEQLQSAVSAFHSQEQSGGHQQPTQQGPGFGRQAQSFYNSR
GISRGGPRNARGMINGYRGSSNGFRGGYDGYRPAFASTPNSGYGQTQFNTPRDYSNGNYQ
RDGYQQNYKRGASQGPRGVSRGSTQAMRS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcaatgaatgcaaatagaacggtgcaatctgccagcccagacatgggatcc
gctccagggttagcaggcaattttgcactcggtggacagtcagacgttatgaagcaagtg
ctgtgtgtcatcgacaagaaagtccgcaacatggagaaaaaaaagagcaaattggatgat
tataaagtcaggaagaataaaggggaaggtctcaaccaggaccagctggaggccctctcg
aagtaccaggaagtcatgaacaacttggaatttgcccgagagttgcagaagacttttatt
actttggggcaagatctccagaaagtggtaaagaagtctgtacggcgggagcagctgcag
cgagaggaggcagaacagagaaagctcaagaatgttctggagctgcagtttgttctggat
cgcctgggtgacgacgctgtacgacaggacctgaagcagggggtcagcggctcaccgctg
ctgaccgatgcagacctcgcagcttttgatgagttctacaagttggtgggaccagagcgt
gatcagaacgtgaggatgactgatcaatatgaagaagcatctgtgcacctctgggagctg
ctggaagggcgggataagccagtggttggaacaacatacaaggcattgaaagagactttg
gaccaggttctgctgagtgggtacttcgaccggattccatctcaccaaaatggagtgtgc
gaagaggaagaggaggaagagtcggtcccaggagcagcagtggcagcagtagctgaatcg
tcggaggcagaagagcagacggttgatccagaaacagaagtaattgaagaattcacagag
tccattacagttgaaacaacagaatttgtaaacagacagttcattccagacagctcttac
agtggcagtgaaaaagagcagggtgatgagtggaccagagaaactgaggctgtaagtgcc
ttgcagcagcagcaacaacaacaacctgtacagcctgcagctccccctgtggctctggag
actcatcctgtaactttaacgtctcctgttccacctactgaccccatggtccgaaaacaa
gtagtgcaggacctaatggcacagatgaagggaccatacaacttcatgcaggactccatg
ttggactttgatggaacgcccattgatccagccattgtatcagcgcaaccaatgaaacct
gctccgaccatagatgtaccacgtttggtttgttcaccaggtcaccctgatccccggccg
atccagtccaactctgttcctgttcaacctgagcccacacaagttcccattgtctcccca
acgccacctcagatgtatcagacctcacacacaccagatcctcgacccccaacagagtct
attgaccccatccagacctccatgtcattgtcgtcagatcagcctcccccctccacagcc
ctccctcctgcctcacagacgcaggtcttccagcctgtttccaaagttcctcacagcagt
ggcatcaatgtcaatgcagctccattccagtcaatgcaaacagtgttcaaccttaatgct
ccagtcccgccagctaatgagacagaggtcttaaaccaggccagccaataccagaacagc
tacaatccggccttcagcagccagtcgcagcatcctgtagagcagccagagatgcagtca
gaacagctacagtctgcagtcagtgccttccattcccaagagcagtcaggaggccatcag
cagccgactcagcagggcccaggttttggcaggcaggctcagtccttctataacagcagg
ggcatatctcgtggaggaccccgaaacgccaggggcatgatcaacggctacagaggctcc
tccaatggatttagaggaggttatgatggttatcgtcctgctttcgccagcactcctaac
tccggatatggacagactcagttcaacacacctcgtgactactctaatggcaattatcag
agggacggttaccaacagaactataagcggggagccagccagggacccagaggagtatca
agaggcagcactcaagcaatgagatcctga
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