Austrofundulus limnaeus (annual killifish): 106533030
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Entry
106533030 CDS
T06063
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106533030 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alim03009
]
106533030 (bms1)
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
90S particles
GTPase
106533030 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
RNA_helicase
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
106533030
NCBI-ProteinID:
XP_013884686
UniProt:
A0A2I4CXF8
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MDSEGKKPKKHQQKHSGPKADRKKLKKQGAPQEEDERKRNPKAFAVQSAVRMAKTFHRAQ
DIKTKKHHIPVVDRTSLEPPPVVIAVVGPPKVGKSTLIRCLIRNFTRQKLGDICGPVTIV
SGKKRRLTFMECNNDINTMVDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMG
VLTHLDSFKNNKTLRKTKKKLKHRFWTEVYQGAKLFYLSGMVYGEYQNQEVKNLGRFISV
MKFRPLVWQTSHPYVLVDRIEDLTDPENIRTNPKCDRTVSLYGYLRGAHLKNRSHVHIPG
VGDFQVGDVNFLQDPCALPDAQKKRALNEKERLLYAPMSGVGGLVYDKDAVYIDLPASHV
NQQQEELRPTTELVQSLIDTHATLDAKMAVSKVSLFSGSAVLDPTDVTEQSRQQEGFEEE
CVWDPNMKRKRRKVIFTEEEDDDDDDSGSTDSEDSDQVDDEEDENDDLVTFLKEARTECE
GMTADGVPPKKVQKLGXDLAEVPAFADSEDELENSEDEDESCEAGDSGRSSEEEESVDEE
GRTAEEXVKTQTEQETEEEEEHGALRWKEGLQQKAAEAFLRQQEAAPNLRKLVYGSVIEA
EDSKQEEEEEELGGLFRVSLSQKSKKVKANTADCSRFTPDSSHNWDLEEMLNSIRDCFVT
GKWEEEQDALTLLKQDEELYGDFEDLETGEFHSSKAAGQDEAENEESDEDKDVPVKMDDE
EVQRNKRLEKKRKLKERFNAEYDDADATYFDDLKEEMQKQAELNKAEFEDMDDETRVQYE
GFRPGMYIRIEIPSVPCEFITNFDPHYPIILGGLGSSESNIGYLQMRLKKHRWYDRILKT
RDPLIFSLGWRRFQTIPLYHIEDHNGRHRLLKYTPQHMHCGASIWGPITPQGSGFLALQS
VAGTKANFRIAATGVVLDLDKSVTIVKKLKLIGYPYKIFKNTCFVKGMFNTVLEVAKFEG
ASIRTVSGIRGQIKKALSTPLGAFRATFEDRLLMSDIVFLRSWYPVSVPQLYNPVTSLLL
PPSQKDNWSGMRTLGQLKHDLGIRNNPNPDSLYKPIVRARRRFNPLHIPKELQKALPFKS
KPKQQQSKGKTPRDLQRPSVIREPHERKVAALLQALSTVHNYKKLKTHTAQHAKHKGFLQ
QKDKQDEAKQKRQRQAKKKLYRAMGQTDKKKLSSSLKGAPKDS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagggaagaaaccaaagaagcaccagcagaagcacagcggcccaaaggca
gacaggaagaagctgaagaagcagggcgctccacaagaggaagatgaaagaaaacgcaac
cctaaagcattcgcagttcagtctgctgtgcgtatggccaagacgttccacagggcccag
gacataaaaacaaaaaaacaccacatccctgttgtggaccgaacttcactagaacccccg
ccagttgtgattgcagttgttggtcctccaaaagttggaaaaagcaccctgattcgctgt
ctgatcagaaatttcactcggcagaagcttggtgacatctgtggacctgtgaccattgtt
tctggcaagaagcggcggctgactttcatggagtgtaacaacgacatcaacacaatggtt
gatctggccaaggttgctgaccttgtgttaatgttaattgatgccagctttggctttgag
atggagacgtttgagttcctcaacatttgtcaggtgcatggtttccctcgaatcatgggt
gtactgactcacttggattcattcaagaacaacaaaacattgaggaagactaagaagaag
ctcaaacaccgtttttggactgaagtttaccaaggagcgaaactgttctatctgtctgga
atggtgtatggagaatatcagaatcaagaagtgaagaaccttgggcgcttcatctctgtc
atgaagtttcgtcctctggtgtggcagacctctcatccttatgtgctagttgaccgcatt
gaggacttaacagatcctgagaatatcaggacaaaccccaagtgtgacaggactgtgtca
ctctacggctacctgagaggggctcatttaaagaacagaagccacgtccatattccaggt
gttggagactttcaagtgggtgatgtgaacttcctgcaagacccatgtgctctgccagac
gctcagaagaagagagccctgaacgaaaaggagcgactgctttatgcaccgatgtctggg
gtcggggggctcgtgtacgacaaagatgctgtttatatcgaccttcctgccagccacgtc
aatcagcagcaggaggagctgcgtcccaccacagagctggtgcagtctctcattgacaca
cacgctactcttgatgccaagatggccgtcagtaaggtgtctcttttcagcggctcggcc
gtgttggacccaacagatgtgaccgagcagagcagacagcaggagggatttgaggaggaa
tgtgtctgggatccaaacatgaaaagaaagagaaggaaagtgatcttcactgaggaagag
gatgatgatgatgatgatagtgggtctactgacagcgaggacagtgaccaggttgatgat
gaggaggatgaaaatgatgatttggtcacgttcctcaaagaggccagaactgaatgtgaa
gggatgacagcagatggtgtgccgccaaagaaggtgcagaaactaggagamgacctggct
gaggtcccagcgtttgcagacagcgaggatgagctggagaacagtgaagacgaggacgag
tcctgtgaagcaggtgattctggacgttcttcagaagaggaggagtctgtggatgaagag
ggcagaacagctgaagaaasagtgaaaacacaaacagaacaggaaactgaggaggaagaa
gaacatggggctctgaggtggaaggagggtctacagcagaaagcagcygaggccttccta
cggcagcaagaagctgctccaaacctgagaaaactggtctatggttcagttatcgaagca
gaggattccaagcaagaagaagaggaggaggagctgggaggactgtttagagttagcctc
tctcagaaaagcaagaaggttaaggcaaacacagcggactgctcccgtttcactcctgac
tcctcccacaactgggatttggaagagatgttaaactcaatcagggattgttttgtgaca
gggaagtgggaggaggaacaggatgctttgactctgctgaagcaggatgaggagctgtat
ggagactttgaagatttggaaacaggagaattccactcaagtaaagcagcagggcaggat
gaagctgagaatgaagagagtgacgaagacaaagatgtcccggtgaagatggatgatgaa
gaggttcagaggaacaagcgtctggagaagaaacgcaagctaaaggagaggtttaacgca
gagtatgatgatgctgatgccacttactttgatgacttgaaggaagagatgcagaagcag
gctgagttaaacaaagcagagtttgaggatatggacgatgaaactagagttcagtacgaa
ggcttccggccgggaatgtacatccggatagaaatcccctctgtgccttgtgaattcatt
acaaactttgacccacattatcccatcatccttggaggcctgggctccagtgagagcaac
ataggatatcttcagatgcgactgaagaaacacaggtggtatgaccgtatcctgaagaca
agagacccactcatcttctccttgggctggagacgtttccagaccatccctctctaccac
attgaggatcacaacggtcgccaccgcctgcttaaatacacaccacagcacatgcactgt
ggagcctccatttggggtcccattacaccacaaggttctggtttcctcgctctacagtca
gtggcaggaacaaaagcaaatttccgcatcgcagccacaggagtcgtcctggatttggat
aaatcagtgacaatcgtgaagaagctcaaactgattggctatccttacaagatctttaag
aacacttgctttgttaagggcatgtttaacacagtgctggaggtggctaaatttgaaggc
gcctcaatccgaactgtgtcagggatcagaggtcagattaagaaggctctgtcaacaccg
ctgggggcttttagagccacgtttgaagaccgtctgttaatgagtgacattgtgttcctt
cgctcctggtatccagtgtctgttcctcagctttacaacccagtcacctccttgttgctg
cctcccagtcagaaggacaactggtctggcatgagaaccctgggccagctcaaacatgac
ctgggtatccgcaacaatcccaaccctgactctctttacaagccaatagttcgagctcga
cggcgcttcaacccccttcacatccccaaggagctgcagaaagccctccccttcaagagc
aaacccaaacagcaacaatctaagggaaagacccccagggacctccagagaccaagtgtg
atccgagagccccatgagaggaaggtggcagcactgcttcaggccctgagcaccgtccac
aactacaagaagctgaagacacacacagcgcagcacgccaaacacaaaggcttcctccag
cagaaggacaagcaggacgaggccaagcagaagagacaaagacaggcgaagaaaaaactg
taccgcgccatgggtcagacagacaagaagaagctgagctccagcctgaagggggcgccc
aaggacagctag
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