Austrofundulus limnaeus (annual killifish): 106533144
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Entry
106533144 CDS
T06063
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03030
DNA replication
alim03410
Base excision repair
alim03420
Nucleotide excision repair
alim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106533144 (rfc2)
03410 Base excision repair
106533144 (rfc2)
03420 Nucleotide excision repair
106533144 (rfc2)
03430 Mismatch repair
106533144 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alim03032
]
106533144 (rfc2)
03036 Chromosome and associated proteins [BR:
alim03036
]
106533144 (rfc2)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106533144 (rfc2)
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106533144 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
106533144 (rfc2)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106533144 (rfc2)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106533144 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
106533144 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
Rad17
Mg_chelatase
AAA_11
nSTAND3
RuvB_N
AAA_assoc_2
AAA_19
DEAD
MipZ
AAA_5
AAA_18
AAA_30
AAA_28
RNA_helicase
AAA_24
NTPase_1
ABC_tran
SLFN-g3_helicase
MeaB
DNAX_ATPase_lid
AAA_23
AAA_25
T2SSE
AAA_2
DUF815
Motif
Other DBs
NCBI-GeneID:
106533144
NCBI-ProteinID:
XP_013884838
UniProt:
A0A2I4CXW5
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MDADMAEAPSGQKPAEAGDPSSRSSYELPWVEKYRPLKLSDIVGNEETVSRLEVFAREGN
VPNIIISGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDVVRNKIKMFAQQKV
TLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVL
RYAKLSDAQVLARLQDVVTQERLSVSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGYINS
ENVFKVCDEPHPLLVKSMLGHCVGGDVDQAYKVLEHLWALGYSPEDIIGNIFRVCKTYQM
AEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKSAPPTAS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggacatggcggaggcaccgagcgggcagaagccggcggaggccggggacccg
tcgtcccggagctcctacgagctgccctgggtggagaagtaccggccgctgaagctcagc
gacatcgtggggaacgaggagaccgtgagccgcctggaggtgttcgcccgggagggaaac
gtccccaacatcatcatctcaggtcctcccggcacaggaaagaccaccagcatcttgtgt
ttggcccgggctctgctgggagcgtccatgaaagacgctgttctggagctgaacgcctcc
aacgacagggggatcgacgtggtgaggaacaagatcaagatgttcgcccagcagaaggtc
acgctgcctaaaggtcgacacaagatcatcatcctggatgaagcggacagcatgacggac
ggcgcgcagcaggctctcaggaggatcatggagatctactcgaagacgacgcgcttcgcc
ctggcctgcaacgcctccgataagatcatcgagcccatccagtcgcgctgcgccgtgctg
cgctacgccaagctgtccgacgctcaggtgctggcccggctgcaggacgtggtcacccag
gagcgcctgagcgtgtccgacgacgggctggaggccgtcatcttcaccgcgcagggagac
atgagacaggcgctcaacaacctgcagtccacgaactcgggcttcggctacatcaacagc
gagaacgtgttcaaggtgtgcgacgagccccaccccctgctggtgaaaagcatgctggga
cactgcgtgggcggggacgtggaccaggcctacaaggtgctggagcacctgtgggctctg
ggctactctccagaggacatcatcgggaacatcttcagggtctgcaagacctaccagatg
gccgagtacctgaagctggagttcatcaaggagatcggtttcactcacatgcgggtggcg
gagggggtgaactccctgctgcagatggccggtctgctgggccgtctctgcagtaagtcg
gctccgcccaccgccagctga
DBGET
integrated database retrieval system
