Austrofundulus limnaeus (annual killifish): 106533213
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Entry
106533213 CDS
T06063
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03030
DNA replication
alim03420
Nucleotide excision repair
alim03430
Mismatch repair
alim03440
Homologous recombination
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106533213
03420 Nucleotide excision repair
106533213
03430 Mismatch repair
106533213
03440 Homologous recombination
106533213
03460 Fanconi anemia pathway
106533213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106533213
03032 DNA replication proteins [BR:
alim03032
]
106533213
03400 DNA repair and recombination proteins [BR:
alim03400
]
106533213
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106533213
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106533213
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106533213
MMR (mismatch excision repair)
106533213
DSBR (double strand breaks repair)
HR (homologous recombination)
106533213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Pox_vIL-18BP
RADX
DUF223
Motif
Other DBs
NCBI-GeneID:
106533213
NCBI-ProteinID:
XP_013884908
UniProt:
A0A2I4CY38
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MANLSEGAIEALANGSGWNDAVLQLVNIRKIEGGNGPARFRVMMSDGRHTLSSFMLSTQL
NYMAEDNILVPNTVCNLKRHVTNILKDGRRVVIILEIDVLKPAEEVAGRIGEPTPYIDSQ
NKGVQQAPAPVPESRPPLQQQNRNEVSRGYNKDLVKKAPPAMPDTPGGSSKVVPIVSLNP
YQSKWTVRARVTNKSNIRSWSNSRGEGKLFSMEIVDGSGEIRVTGFNKEVDKFYSLLEVG
KVYYISKGSLKIANKQYTSVKNDYEMTLNGESTIIPCEDSCDVPMVQCDFVSIGDLENKG
KDSIVDVIGVCKSVDEMTRITTKNNREVSKRTITLMDMSGKMVMLTLWGEEAENFDGSAQ
PIVAIKGAKVSEFGGRSLSTSFNSTLLVNPDIPEAYKLRGWYDKDGHTIVGHSLTERGGG
MSMQFTWKTLSDVKTEHLGHGEKADYFSCVATIVYIRKENCLYQACPSQECNKKVIDLQN
GMFRCEKCDKEFPNFKYRLILSANMADYMDNQWVTCFQESAETILGQNAAYLGQLKDSNE
AAFDEIFQRANFKSYVFQNRVKLETYNDESRIKVTVMTVIPVDHVEYSKRLIVNIRNMAG
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctctcagaaggcgcgatagaggccttggctaatggcagcggctggaatgac
gcagttctgcagttggtgaacattcgcaagatagaaggaggaaatgggccagctcgcttt
cgcgtgatgatgagcgatggacgtcacactctgtcttctttcatgctttccacccagctg
aactacatggctgaggacaacatacttgtcccaaacactgtctgcaatctcaagagacat
gtgaccaacatactgaaagatggacgacgagttgtaatcattttggaaatcgatgtcctc
aaacctgctgaagaggttgctggtagaataggagaacctactccgtacattgacagtcag
aataaaggcgtccagcaagctccagctcccgtccctgaaagcagaccacctctgcagcag
caaaacagaaatgaagtaagcagaggttacaacaaagatttggtgaagaaggctccacct
gctatgcccgatactccaggcgggagctccaaagtcgtgcctattgtcagcctcaaccct
taccagtccaagtggacagtccgtgcccgtgtaaccaacaagagcaacattcgctcgtgg
agcaactcccggggtgaaggcaaactcttctccatggagattgtggatgggagtggagaa
atccgtgtcactggttttaacaaagaagtggacaaattctactctctacttgaagttgga
aaggtctactacatctccaaaggttccctgaaaattgccaacaagcagtacacatcagtg
aagaatgactatgagatgacactcaacggggagtctaccatcatcccctgtgaggacagc
tgtgacgttcccatggtgcagtgtgactttgtctctattggcgacttggagaacaaaggc
aaagattccattgtcgatgtgatcggagtgtgcaagagtgtggacgagatgacccgcatc
acaacgaagaataatcgcgaagtatctaagaggacaataactctgatggacatgtccggg
aagatggtgatgctcacactgtggggagaggaggcagaaaactttgacggttctgcacag
ccaattgttgccattaagggtgcaaaagtctcagagtttggaggccggtcgctttctaca
tccttcaacagcaccctgttggtcaacccagatatccccgaggcgtacaagctcagaggc
tggtatgacaaggatggccacactattgttgggcattctctgacagagagaggtggcggc
atgagcatgcagttcacctggaagactttgtctgacgttaagaccgagcatctgggacat
ggagaaaaggctgactacttcagctgcgtagccacaatagtatatatccggaaggagaat
tgcctttatcaggcctgtccaagccaagaatgcaacaaaaaagtgattgacctgcaaaat
ggcatgttccgctgtgagaagtgtgataaagagtttcccaacttcaaataccgcctcatc
ctatctgccaacatggcggattatatggacaaccagtgggtgacttgcttccaggagagc
gcagagaccattctgggccagaatgcagcttacctggggcagctcaaggactcgaatgaa
gctgcgtttgatgaaatcttccagcgtgcaaacttcaaaagttacgtcttccaaaacaga
gtgaagctggaaacgtataatgatgaatcgaggattaaggtcacagtgatgactgtgata
cctgtcgatcacgtggagtacagcaagaggctgatagtgaacatacggaacatggctgga
aagtaa
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integrated database retrieval system
