Austrofundulus limnaeus (annual killifish): 106533223
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Entry
106533223 CDS
T06063
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106533223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106533223
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Major cadherins
106533223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2254
DUF2304
Motif
Other DBs
NCBI-GeneID:
106533223
NCBI-ProteinID:
XP_013884916
UniProt:
A0A2I4CY40
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MRTDFAVVLTAALLLHTFWRNNAEHASKGPCRPGFSQSFYSVLISRDVLQGQGIVKVKFD
DCAGNDGVVFQSSDPVFGVRTDGSIFAQEDVASLHEPVQFKVTASGPQAEVWETVIQLTA
TDLTSPGRNENEVEEEEKKQKEETFQAPPPVIMFSGSRFNSTKGHRRQKRDWVIPPINVA
ENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFSIDPMVGKMFVTRPLDREH
RSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSVDEGSKPGTYVMHL
SAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIGTVAPGLDREKVSQYTIIV
QATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENQVDVAVANLTVIDAD
QPHSPNWNAIYRIISGDPNGHFTIRTDPVTNDGMVTVVKPVDFEMNRGFMLTVVVSNQAH
LASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSLTTFSASDPDRLQM
QQLIRYSKLNDPADWLSINRTNGQIVTTAVLDRESVYVKNNIYEATFLATDNGSPAASGT
GTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADTDPNAGPFVFELPNFPS
SIRRNWTISRISGDYARLGLRYQIYLEPGMYEVPVIVSDSGNPPLSNRSVIKVKVCPCDE
HGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKERQTKQLLIDPEDD
VRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIMSKPPGVRRVDERPIIPESQYPIRPV
VPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSTGDQDYDY
LNDWGPRFKKLADMYGGGDDD
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagaacggacttcgctgtggttctgacagcagcccttcttcttcacacattctggagg
aataatgcggagcatgcctccaaaggtccctgtcggcctggcttctcacaaagcttctac
tctgtgctgatttcaagggatgtactgcaaggccagggcatagttaaagtgaagtttgac
gactgcgcagggaacgacggtgtggttttccagagcagtgaccctgtcttcggtgtgcga
acagatggatccatctttgcccaggaagatgtagccagcttgcatgaaccggtccagttt
aaagtaacagcaagtggcccgcaggcagaagtctgggagactgtgattcaactaacagcg
actgacctaacatcacctgggcgaaatgagaatgaggttgaagaagaagagaagaagcaa
aaagaggagacgttccaagcgccgcctcctgtcatcatgttctcgggatcccgcttcaac
agcaccaagggtcatcgaaggcaaaagagggactgggtgatcccaccgatcaatgtggcg
gaaaactcccgaggcccgttccctcagatgctcgtcagcattcgttcagaccaggaccag
gacatctctatccggtacagcatcactggagtgggagcggatcaaccgcccaacgaggtg
ttcagcatcgacccaatggttggaaagatgttcgtcaccaggcctctggatcgcgagcat
cgatcttcttatcatctgcgagctcacgcagtggacatgaacggaaaccaggttgagaac
cccatcgacctctacatcttcgtcatagacatgaatgacaacagaccagagttcaaaaac
caggtctacaatggctctgtggatgaaggctccaaaccaggaacttacgtgatgcatctg
tcagcatttgatgctgacgacaacaccacggctaatggcatggtgcgctatcgaatcctg
tcccagaccccacacagtcctatccccaacatgttcaccatcaacagtgagacgggggat
attgggacagtagcacctggacttgatagagagaaagtgtcccagtacaccatcattgtg
caagccacggacatggagggcaaccttaactttggcctgtccaacacagccactgccatc
atcactgtcacagacatcaatgacaacccaccaatgctgacctccagaactttttccggt
gaagtcccagagaaccaagtggatgttgctgtggctaatctgacagttattgatgccgac
cagccccactctccgaactggaacgccatctacaggatcatcagcggagacccaaatggg
cacttcaccatccgcactgatcccgtcaccaatgacggcatggtcactgtggtgaagcca
gtagactttgagatgaaccgcggcttcatgctgacagtggtggtgtcaaaccaggcccac
ctggccagcggcatccagtcctcgcttcagtccaccgctggagtcaccatatctgtgcaa
gatgtcaacgagcctccctatttccctacaaaccctaaacacatccgcttcgaggagggc
gttcctgccggcaccagcctgacaactttctcagcttcggatcctgaccggcttcagatg
caacagttaatcaggtattccaagttgaatgaccctgctgactggttgtccatcaacaga
accaatggtcagattgtaaccacagcagtgctggaccgggaatctgtctacgtcaaaaac
aatatttatgaagcaacatttctggctacagacaatggttcccctgcagccagcggcaca
ggcacgctgcagatctacttgatagatattaatgacaaccccccagcgctcgtacccagg
gagtctcagatctgtgaaaggatgaacaagaacgtcaacggtgtcaacatcactgctgct
gatgctgacacggatcctaacgctggaccctttgtcttcgagctgcccaacttccccagc
agcatccggcgcaactggaccatttctcggatcagtggtgattatgcccgcctgggtctc
cggtaccagatatacttagagccaggaatgtacgaggttcctgtaattgtgtccgactcg
ggcaaccccccgctgtccaacaggtcggtcatcaaagtcaaagtgtgtccctgtgatgaa
catggagactgcaccacactgggagccgttgcagccgccggcctgggaacgggagccatc
atctccatcctcatctgcatcatcatcctgctcagcatggtgctgctgtttgttgtgtgg
atcaagcgccgagaaaaagagaggcagacaaagcagctgctcattgaccctgaagatgat
gtgagagacaacatcctcaaatatgatgaagagggaggaggagaggaggaccaggattat
gacttgagccagctgcagcagcccgactctttagaacacatcatgagcaaaccgcctggc
gtacgcagagtggatgagcgtcccatcatcccagagtcccagtaccccatcagaccggtc
gtgccccaccctggagacattggggacttcatccatgagggtctgcgagctgcagacaac
gaccccacggctcctccgtacgactccctgttggtttttgactatgagggcagcggctcc
actgccggctcggtcagctctctcaactccaccagcacgggggaccaggactatgactac
ctcaatgactggggaccccgcttcaagaagctggccgacatgtacggcggaggggatgat
gattaa
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