Austrofundulus limnaeus (annual killifish): 106533311
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Entry
106533311 CDS
T06063
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04080
Neuroactive ligand-receptor interaction
alim04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106533311
04081 Hormone signaling
106533311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106533311
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alim03310
]
106533311
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106533311
Nuclear receptors [BR:
alim03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
106533311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106533311
NCBI-ProteinID:
XP_013885031
UniProt:
A0A2I4CYF5
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Position
Unknown
AA seq
403 aa
AA seq
DB search
MFNKQDSASSEGDEKGWPDAPKRKRKNSQCSVKSMSGYIPSYLEKDEPCVVCGDKATGYH
YRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCISVGMAMDL
VLDDSKRVAKRRLIEENRERRKKEEMVRTLQLRPEPDGAEWELIRMVTEAHRNTHASHKQ
KPKFLPDEIGHGQVMPTSNGDKVDIEVFSEFTKIMTPAITRVVDFAKKLPMFSELPCEDQ
IILLKGCCMEIMSLRAAVRYDPQTDTLTLSGEMEVKREHLKNGGLGVVSDAIFDLGKSLA
QFNLDDSEVALLQAVLLMSSDRSGLMSVEKIEQWQDAYLLAFEHYINYRKHNIPHFWPKL
LMKVTDLRMIGACHAGRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagcaggacagcgcctcatcagagggcgatgagaaagggtggcctgatgcc
ccgaagaggaagaggaagaacagccagtgttcagtgaagagcatgtctgggtacatcccc
agctacctggagaaggatgagccctgtgtggtgtgtggggacaaggccactgggtaccac
taccgctgcatcacctgtgaaggctgcaagggttttttccgcaggacaatccagaaaaat
ctccatccttcttactcctgtaaatatgatggctgctgcatcattgacaagatcacccga
aaccagtgccagctgtgccgatttaagaagtgcatctctgtgggcatggccatggacttg
gtgttggatgactccaagcgcgtggccaagaggcgcctcatcgaggagaaccgagagcgc
cggaagaaagaggagatggtgcggacgcttcagctgaggccggaaccggacggtgcagag
tgggagctgatccggatggtgacagaggctcacaggaacacccatgccagccacaagcag
aaacccaagttcctgccagatgaaatcggccatggtcaggtgatgcccacctcaaatgga
gataaagtcgatatcgaggtcttcagtgagttcaccaagatcatgacccctgccattact
cgtgttgttgattttgccaagaaactgcccatgttttcagagttgccttgtgaagatcag
atcatcctgctgaagggctgctgcatggagatcatgtcgttgcgcgccgcggtacgctac
gaccctcagactgacacgctaacgctaagcggcgagatggaggtgaagcgagagcacctg
aaaaacggcgggctgggagtggtgtcagacgccatttttgatctgggcaagagcctggca
cagtttaacttggatgactcggaggtggcactactgcaggctgtgctgctcatgagctca
gaccgttcggggctgatgagtgtggagaagattgagcagtggcaggacgcctacctgctg
gcatttgagcactacatcaactaccgtaagcacaacattccccacttctggcccaagctg
ctgatgaaggtgacggacctgcggatgatcggagcatgccatgccggacgcttcctccac
atgaaggtcgagtgtcccaacgagctctttccaccgcttttcctggaggtctttgaggac
caggaagtgtga
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