Austrofundulus limnaeus (annual killifish): 106533322
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Entry
106533322 CDS
T06063
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106533322
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
106533322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
Crescentin
AAA_29
HR1
TMF_DNA_bd
DUF745
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
106533322
NCBI-ProteinID:
XP_013885041
UniProt:
A0A2I4CYG5
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MSKRKGKVVCDETALKLCRLTAVRTETDPDEQNRQGPTSDSLSHSVSGDIGFIESITLKN
FMCHHSLGPFQFGPNVNFIVGNNGSGKSAILTALIVGLGGKATVTNRGVSLKDFVKAGEN
SADITVKLRNKGPDAFKKGLYGDYISVEQRIFSDGSRIYKLKNKSGQIVSNKKEELTAIL
DHFNIQLDNPVSILSQEMSKQFLHSKNESDKYKFFMKATLLEQMKRDYIHIKHTETITRQ
QVERQEECLKDLKQEFLQKKERYENLSSYSELKEALENMKTKMAWALVTEKEQSIQQLKE
DTEREEANNKHQDNLRLCQTKVVQVEKKLQLIKKKSDTLKEQQKTLTEDNLKLKQQVKSI
SKAHKEQELVYVRALNKLKQTKREQTFLQEKINKAKTSEISKSGDNKRTKHQLRLCDLRE
QLAELQTKCSQLNEEIKKKHQALLKGKEERGKLSGEEKSLQFAYESKLKRKNQLLASRSN
KLKRFGDFLPDLMTAIDEACAAGQFLKRPVGPIGACISLKDPSLAVAVECCLRSFMKAFC
CDNYKDESVLQRLMTRFYPKGNRPQIVVSAFSNKLYNVHQRKVRYPDYPTVLDTITAANP
IIINCLIDMRGIETILIIKEKNKAREVMQKGRPPKNCREAFTSEGDQVFPNRYYTSEFNV
AKYLSGDIETEISLLESELENLQAQLSRFQLQVNSVTEDIVSMENSLNNTIKTLKKTQSS
ENQVKAAITELETAVEEQSDDISSLVDVAQENQQKIEAEKQIVQEAKSEFDKHQKVLEDA
NSKYLSVRNKIDQLSEEIESLKDEQVKLEAECVKHERNLKILEKKLKTHEDNIQAMKNEL
SEKEEELKESVAKVSQISPERQSITCSTKSIDTDIIRLKKKLKVYESNYGEQEQVVREYA
EALSLYKDKTNQVRDLQKFIDRLKNIMSDRQNRYKILRRSLSVRCKLYFNNFLIKMNCCG
SMIFDHNNETLSILVKPPGREKDGASDMRSLSGGERSFSTVCFMLSLWEITESPFRCLDE
FDVYMDMHNRRICLDLLLELSERQHLRQFIFITPLNTRFLQTTALIRIHHLHDPEGQESR
AGDAQSQRHTS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaaggtaaagtggtctgtgatgagaccgctctgaagctctgccgactg
acagctgtgaggactgaaactgatccagatgagcagaaccgtcagggtccaacttcagac
agcctctctcactctgtttcaggagacattggattcattgagagcataactctgaaaaac
tttatgtgccaccattctctgggtccgttccagtttggacccaatgtgaacttcatcgta
ggcaacaatggaagtgggaaaagtgccatcctcactgccctgattgtaggtctgggtgga
aaggctacagtgacaaacagaggggtgtctctcaaggattttgtgaaagctggtgaaaat
tctgcagatataaccgtcaagttaagaaacaaaggaccagacgccttcaaaaagggactt
tacggggactacatctctgtggagcaacgcatcttcagtgatggatcccggatctacaag
ttgaagaacaaatctggtcaaattgtgtcaaacaagaaggaagaattaacagccattctg
gaccattttaacatccagctggacaacccagtttccatcctcagccaagaaatgagcaaa
cagttcctgcattccaaaaatgaatcggacaaatataagttcttcatgaaagcaacgctg
ctggagcagatgaagagagattacatccacattaaacacacagagacaatcactcgtcag
caggtggagagacaggaggagtgtctgaaggacttgaagcaggagtttctacagaagaag
gagcgatatgaaaatctgtcctcttacagtgagctgaaggaggctttagaaaacatgaaa
acaaaaatggcatgggctttggttacagagaaggagcagtccatacagcagctgaaggag
gacacagagagagaagaagctaataacaaacatcaggacaaccttcgtctctgtcagacc
aaggttgtacaagtagagaagaagctgcagcttatcaaaaagaaaagcgacacgctaaaa
gaacagcaaaagactcttacagaagacaatctgaagttgaaacaacaagtgaaaagcatt
agcaaagctcacaaggaacaggagcttgtttatgttcgggctctgaacaaactgaaacag
accaaacgagagcaaacctttcttcaggagaaaataaacaaggccaaaacaagtgagatt
tcgaagagcggagacaacaagcgcacaaaacatcaactgagattatgtgatttaagagag
cagcttgcagagcttcaaactaaatgctcacagctgaatgaagaaatcaagaagaaacat
caggcgcttcttaaaggaaaggaagaacgtggcaagttgagtggtgaagaaaagagtctt
cagtttgcatatgagtccaaactgaagaggaagaaccagctacttgccagtcgatccaat
aagctgaagcgttttggggactttcttcctgatttgatgactgcaattgatgaggcctgt
gctgctggacaattcctcaagagacctgttggaccaataggggcatgcatcagtttaaag
gatccctctctggctgtggctgtggagtgctgtctgagaagctttatgaaggctttctgc
tgtgacaactacaaagatgagtctgtcctgcagaggctcatgacccgtttttatcccaag
ggcaacagaccacagatcgttgtcagcgcattctctaacaaactttacaatgttcatcaa
cgaaaggtgcgttatccagattacccaactgtgttggacacaatcacagcagctaacccg
atcatcatcaactgtctgattgatatgagggggatagaaactattctcataatcaaagaa
aagaacaaagcaagggaagtcatgcagaaaggccggccacctaaaaactgtcgtgaagct
ttcacatcagagggagatcaggtgtttccaaaccgttattacacctctgaatttaacgtg
gccaaatacctgagtggagacattgagactgaaataagtttgctggagtcagaactggaa
aatcttcaggctcagctgtccagatttcagctgcaggtgaactctgtcactgaggatatc
gtaagcatggagaacagcctaaataacaccatcaagaccctgaagaagactcagagctct
gagaatcaggtgaaagcagcaataactgagctggagacggctgtggaggagcaaagtgat
gacatcagctctttggtagacgttgcccaggagaaccaacagaaaattgaagcagaaaaa
caaatcgttcaggaggcaaagtcagaatttgacaagcatcaaaaagtgttagaagatgca
aactccaagtatttgtcggttagaaataaaattgatcagctttcagaagaaattgagtct
ttgaaggacgagcaggtgaaactggaggcagagtgtgtgaaacatgagagaaacctgaaa
atcttagagaaaaaactaaagactcatgaggacaatatccaagccatgaaaaatgaactg
tctgaaaaagaagaggagttaaaggaatctgtggccaaagtctcacagatcagtcctgaa
cggcagagcatcacctgcagcaccaagagcatcgacaccgacatcatccgactgaagaag
aagctgaaggtctacgagagcaactatggcgagcaggagcaggtggtcagagagtatgct
gaggccctctccctctacaaagacaaaaccaaccaagtcagagatctgcagaagttcatc
gatcggctcaaaaacatcatgtcagacagacagaacagatacaaaatactgcggcggtcc
ctgtcagtcagatgtaagttatacttcaataacttcctgataaagatgaactgctgcggc
tccatgatatttgaccacaacaatgagaccctttccatcctggtgaagcctccaggcagg
gagaaggatggagcgagtgacatgagatctctgtcaggaggagaacgctccttctccact
gtctgcttcatgctgtcgctgtgggaaatcacagaatcaccgttcagatgcctcgatgag
ttcgacgtctacatggacatgcacaatcgcagaatttgtttggatctcctcctggagctg
tcagagcggcagcaccttcggcagttcatcttcatcactcctctgaacaccaggttccta
cagacaaccgccctaatcaggatccaccacctccatgatcctgagggacaggagagtcga
gccggagacgcacagtcgcagcgacacacaagctga
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