Austrofundulus limnaeus (annual killifish): 106533518
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Entry
106533518 CDS
T06063
Symbol
thbs3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04145
Phagosome
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106533518 (thbs3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106533518 (thbs3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106533518 (thbs3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106533518 (thbs3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106533518 (thbs3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106533518 (thbs3)
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106533518 (thbs3)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Phagocytosis
Opsonins
106533518 (thbs3)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106533518 (thbs3)
Exosomal proteins of colorectal cancer cells
106533518 (thbs3)
Exosomal proteins of bladder cancer cells
106533518 (thbs3)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106533518 (thbs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
106533518
NCBI-ProteinID:
XP_013885313
UniProt:
A0A2I4CZ98
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MAWRIPVLLSIICVHLAAGVPDGADVQGVSSSSSSSSSSVIDLLSLQDSQQGSAAAAVQK
LAGGLSALSDVYLVSTFRLPQKMGGVLFGLYNKQDNRKYLEVAVMGKINKVLVRYVKADG
KLHTANLQNSHLADGRTHSVMVRLGGLQRSSLQAELYVDCRLADTAQGLPPLVPLPREAE
LVEIRHGQKSYVRLQGAVDSLRLALGGSVAQAGALTDCPFQGDASAYNSVSGELHSILGE
HTKALIGQLIIFNQILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKG
VSCMDSLQYPGYTCGPCPPGTSGNGTHCMDIDECELQPCYSPEACLNTMGGFSCKPCPPG
LWGAPLAGSGLDYAKSNKQECVDVDECIDLPDACVSNSVCINSVGSYKCGGCKPGFLGNQ
TSGCFPRKSCSALTFNPCDSHAHCSMERNGEVSCRCNVGWAGNGHTCGMDTDIDGYPDRS
LPCMDNNKHCKQDNCVLTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQ
NSDSDSFGDSCDNCPTVSNSDQKDTDNNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTD
RDRDGVGDACDSCPELSNPMQTDVDNDLVGDICDTNQDTDGDGHQDTRDNCPDIPNSSQL
DSDNDGLGDDCDHDDDNDGVLDDFDNCRLIINPNQKDSDANGVGDVCENDFDNDAVLDQV
DACPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAF
NGVDFEGTFHVNTVTDDDYAGFVFSYQDSSSFYVVMWKQTEQAYWQSIPFRATAQPALQL
KAVKSRTGPGEFLRNALWHTGDTTGEVKLLWKDPRNIGWKDKTSYRWQLSHRPQVGYIRV
KLFEGTDLVADSEVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDSVPEDFKTHRKQVV
MHIQV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaggatcccggttctgctgtcaatcatctgtgtccatctggcagcgggagtc
ccggacggagcggatgtccaaggtgtctcctcctcctcctcctcctcctcctcctcagtg
atcgacctcctcagcctgcaggactcccagcagggctcggcggcggcggcggtgcagaag
ctggcgggcggtctgagcgcgctcagtgacgtgtacctggtgtccaccttcaggctgcct
cagaagatgggcggagttctgttcggactctacaacaagcaggacaacaggaagtacctg
gaggtcgccgtcatgggcaagatcaacaaagttctggtccggtacgtgaaagcggacggg
aagctgcacacggccaacctgcagaactcccacctggccgacgggcggacccactccgtc
atggtgaggctgggcgggctgcagcgcagcagcctgcaggcggagctctacgtcgactgc
cgattggccgacaccgcccagggcctgccgccattggtccctctgcccagggaggcggag
cttgtggagatccgccacgggcagaagtcttacgtccgcctgcagggggcggtggactcc
ctccgcctggctctggggggcagcgtggctcaagctggagctctgaccgactgtccgttc
cagggagacgcgtcggcctacaactcagtgagcggggagctccactccatcctgggtgag
cacacgaaggctctgattggtcagctcatcatcttcaaccagatcctgggagagctgcgg
caggacatcagagaacaggtgaaggagatgtctctgatcaggaacaccatcctggagtgt
caggtttgtggtttccacgagccgcgttcccgctgctcccccaacccgtgctacaaaggt
gtgtcctgcatggacagtctgcagtacccggggtacacctgtggaccgtgtccacctgga
accagcgggaacgggacacactgcatggacattgacgagtgtgagctgcagccctgctac
tctcctgaagcctgtctcaacaccatggggggcttcagctgtaaaccctgtcctcctggt
ctgtggggggcgccgctcgctggatctggactggactacgccaagtccaacaaacaggaa
tgtgtggatgttgacgagtgcatcgaccttcctgacgcctgcgtctccaactctgtctgc
atcaactctgtgggttcgtacaaatgtggaggctgtaaacctggtttccttggcaaccaa
acctccggatgcttccccaggaagtcgtgctctgcgttgacctttaacccctgtgacagc
cacgcccactgctccatggagaggaacggagaggtgtcctgcaggtgtaatgtgggctgg
gcaggaaatggacacacctgtgggatggacacggacatcgatggatacccagaccggtct
ctgccctgcatggacaacaacaaacactgcaaacaggacaactgtgtcctcacacccaac
tccggtcaggaggacgccgacaacgacgggatcggagaccagtgtgatgaggacgcagac
ggagacggcatcaaaaacgtggaggacaactgtcgtttagtccccaacaaagaccagcag
aactcggacagtgactcgttcggagactcgtgcgacaactgtcccaccgtgtccaacagc
gatcagaaagacacggacaacaacggacaaggagacgcctgcgaccaggacatcgatgga
gacggtattcccaacgttctggacaactgtccaaaggtcccgaaccccatgcagactgac
agagacagggacggagtcggagacgcctgcgacagctgtcctgaactcagcaaccccatg
cagacggacgtggacaacgacctggtgggagacatctgtgacaccaaccaggacacggac
ggggacggacaccaggacaccagagacaactgtcccgacatccccaacagctcccagctg
gactcggacaacgacggcctcggagacgactgcgaccacgacgacgacaacgacggcgtc
ctcgacgacttcgacaactgcagactgatcatcaaccccaaccagaaggactccgacgcc
aacggcgtcggagacgtctgtgagaacgacttcgataacgacgcggtgctggaccaggtg
gacgcgtgtccagagagcgccgaggtcacgctcacggacttcagggcctaccagaccgtg
atcctggaccccgagggcgacgcccagattgatccgaactgggtggttctgaatcagggg
atggagatcgttcagacgatgaacagtgatcctggtttggccgttggctacacggcgttt
aacggcgtggacttcgaggggacgttccacgtcaacacggtgacggacgacgactacgcg
ggcttcgtgttcagctaccaggactcgtccagcttctacgtggtgatgtggaagcagacg
gagcaggcctactggcagagcatccccttcagggccacggcccagcccgccctgcagctc
aaggcggtgaagtccagaaccgggcctggggagttcctgaggaacgcactgtggcacacc
ggagacacaaccggagaggtgaagctgctctggaaggatcctcgaaacatcggctggaag
gacaaaacctcgtaccgctggcagctcagccaccggccgcaggtcgggtacatcagggtg
aagctgttcgaggggaccgacctggttgcggactctgaggtggtcgtcgacacgacgatg
agaggaggacgactcggagttttctgcttctcccaggagaacatcatctggtccaacctg
cgctacagatgtaacgactcggtgcctgaagacttcaagactcaccgtaaacaagtggtg
atgcacatccaggtctga
DBGET
integrated database retrieval system
