Austrofundulus limnaeus (annual killifish): 106533542
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Entry
106533542 CDS
T06063
Symbol
snupn
Name
(RefSeq) snurportin-1 isoform X1
KO
K13151
snurportin-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106533542 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106533542 (snupn)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
106533542 (snupn)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
106533542
NCBI-ProteinID:
XP_013885345
UniProt:
A0A2I4CZD8
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All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MPSATMDALTEALSASFAVSKEPNSTAAPHPRMAQYKSKYSVLEQSERRRHFLNLQKSKR
LNYVNHARRLADGDWTGGDSDEGEDMEKQEEGEQQQDGCTEEGMEIERRKLPKHYANQLM
LSEWLVDVPSELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHN
SAMGKDYTILDCIYSEVDRTYYILDIMCWRGHPVYDCPTEFRFFWLQSKVQETEGLSELA
KRNPFRFVSLQSTDCTAASIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMV
SDILGMEVPAGPLTAKPEYASHQLQQIMEHKKVSSEVRPANGSGGYELEYLSTPSPDTED
TLHCFNQKPIKEANMEV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgccaccatggatgccctgactgaagcactctcggccagcttcgctgtgtcc
aaggagcccaacagtacagctgccccccaccctcggatggctcaatataagagcaagtac
agcgtgctggagcagagtgagcgaaggcgccactttctcaacctgcagaaaagtaaaagg
ttaaactatgtgaaccatgcgcggcgcttggctgatggggactggacagggggggacagc
gatgagggggaagatatggagaagcaggaagagggggagcaacagcaggatggctgcaca
gaagaggggatggagatcgagaggaggaagttgccaaagcattacgctaaccagctcatg
ctgtcagagtggttggtggatgtaccctcagaactggacactgactggctgatggtggtc
tgtcctgttgggaaaaggtctctcatcgttgcctcaaagggctccactgctgcttacact
aaaagtggctattgtgtgaaccgtttcccctccttgctgcccggtgggaacagacacaac
tctgccatgggaaaagactacaccatcttggactgcatttacagtgaggtggacaggacc
tactacatcctggacatcatgtgttggagaggacacccagtgtatgattgcccaacagag
tttcgcttcttctggcttcagtctaaggttcaagagacagaaggcctgtcagagctcgcc
aaacgcaacccttttcggtttgtgagtcttcagagcacagactgcacagcagcatccatt
cagaaagctctggcagcagagtacagcttcagtgtcgacgggctcctcttctaccaccgg
cagacccactacacccctggcagcacccctctggtcggctggctccgcccctacatggtc
tcagacatcctgggtatggaggtccctgcaggacctctcactgccaaaccagagtacgcc
agccaccagctgcagcagatcatggagcacaaaaaggtatccagtgaggtccgcccagca
aatgggagtggaggctacgaactggaatacctgtccactccaagcccggacactgaggac
acgttgcactgcttcaatcagaagccaatcaaagaagcaaacatggaggtctga
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