Austrofundulus limnaeus (annual killifish): 106533580
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Entry
106533580 CDS
T06063
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106533580 (npas3)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106533580 (npas3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS_9
PAS
Motif
Other DBs
NCBI-GeneID:
106533580
NCBI-ProteinID:
XP_013885387
UniProt:
A0A2I4CZG8
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MASTHHNSTVELTGSSAFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAATEDGTSSASS
SSPSETPEPVESSSPSLLSPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIR
MALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMD
LTPVDIVGKRCYQLIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIA
VNAKNSNEKNIIWVNYVLSNPEYKDTPIDIVQLPNLPEKTSESSESSDSESESKENSDNE
KSEGKSAQHVDHGEDPDRKQQQPGQSHCSSEQEMKRHEEGDSSSNPESQDSEDSLEPSDG
EQEVTTGGGGGGGGRLGRLAGLGGLEGLGAMGGLGTLGGLHIKVEHYRDGEELQLHNSHT
SSSEEEEEEEXXEEEEEEGGGVQDCDSGSAGSSLHKRRKRRKVQKWDGSRSRRLRLTTSP
PSPSEDLTPPADPSETTSAHLLPPGSPDSTGATSSVLKIKTEMAEPINFDNDSSIWNYPP
NREISRNESPYSMTSKPPAGGGHETFPSPQGGSLHVVIPDSVLTPPGTEGGAGGPRKPAY
NGSSAPSSSSSATSLAPPPSNSSSADPLSPPLSASPRDKQQGTPTTSSSSSSSTSSSSSL
TSSSSSLLYSGDIEALQRLQAGNVVLPLVHRVTGTLAPSSSTAPRVYTTGTIRYAPADVT
LAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMTAAAAAGPFVGSAAPAGG
NGTLGGQMPAAANVFTTAEGLFSTLPFPVYSNGIHSTQTALERKED
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcatctactcaccacaactcaacagtggagctgaccggcagcagtgcgtttgactac
atccaccccggggaccacgtggagatggccgagcagctcgggatgaagcttcctccaggc
agaggcatgtctctgtcccagggagcggccactgaagacgggacgtcctcagcttcatcg
tcctctccctctgagacacctgaaccagtggagtccagcagtcccagtctcctgtctcct
gataattctctggaacgatctttcttcatccggatgaagtcgacgctcacaaagagagga
gtccacatcaagtcctcaggatacaaagtgatccacatcacaggtcgtctgcggatccgg
atggctctgacccacagccgctccgtgcccaatcagatcatggggatggtggtggtggct
cacgccctgcccccgcccaccatcaacgaggtccggatcgactgccagatgtttgtcacc
agagtcaacatggacctgaagatcgtttactgtgagaacaggatcagtgactacatggac
ctgactccggtggacatcgtggggaagagatgctaccagttaattcatgctgaagatgtg
gaggggatcagacagagtcacctggacttgatgaacaaaggtcagtgcgtgaccaagtat
taccgctggatccagaagaacggtggctacatctggatccagtccagcgccaccatcgct
gtcaacgccaagaactccaaygagaagaacatcatctgggtcaactacgtcctcagtaat
cctgagtataaagacacgcccattgacattgttcagctgccaaacctgccagagaaaacg
tccgagtcctctgagagctcagactcagagtctgagtccaaagaaaactcagataatgag
aagtctgaggggaagtctgcccaacacgtggaccacggcgaggacccggacaggaaacag
cagcagcccggacagtcccactgctcctcagaacaggagatgaaacgtcacgaagaggga
gacagttccagtaacccagagagccaggacagtgaggacagtctggagccgtcagacgga
gagcaggaggtcaccacaggaggaggaggaggaggtggagggaggttggggagattagca
ggactgggaggactagagggtctgggtgccatgggtggactgggcactttgggtggtctt
catattaaggttgaacactatagagatggtgaggagctccagctgcacaactcacacacc
tcctcctcagaggaggaggaggaggargaggakgakgaggaggaggargaagaagggggc
ggagtccaggactgtgacagtggtagtgccggcagttcgctccacaaacggcggaagagg
agaaaagtccagaagtgggacggctcacgaagcaggaggctccgtctgaccacctctccc
cccagcccttcagaggacctcactccccctgccgacccctcagagaccacctccgcccac
ctcctgccccctggatcccccgacagcacaggtgcaacgtcctcggtcctgaagatcaag
acggagatggcagaacccatcaacttcgacaacgacagcagcatctggaactaccccccc
aacagagagatctccaggaacgagtccccctacagcatgacctccaaacctccggccggc
ggggggcacgagaccttcccttcaccgcagggagggtccctccatgtggtcatccctgac
tccgtcctcaccccccctgggactgaggggggggcaggagggccgaggaagcctgcttac
aatggaagctctgcgccgtcgtcctcttccagcgctaccagtttagctccgcctccttcc
aactcctcctccgcagaccccctgtcccctcctctgtccgcctccccgcgggacaaacaa
caaggcactcccaccacctcctcctcctcgtcttcttccacctcctcgtcttcatcctta
accagctcttcctcatccctgctgtactccggggacatcgaggcgctccagcgtttgcag
gcgggtaacgtggtcctgccgctggtccaccgggtcaccgggaccctggctcccagcagc
agcacggctccgcgggtctacacgaccgggaccatcaggtacgcgccggcggacgtcact
ctggccatggcgcaggggaacctcctccccaacgccgccatgaacttcgtggacagctcg
gggttcggtctggaccccaagacgcccatggagatgctgtaccaccacgtgcaccggctc
aacatgacggccgcggcagccgccggcccgtttgtggggtccgcggcacccgccgggggc
aacggcaccttaggaggccagatgccggcggcggccaacgtcttcaccacggccgagggg
ctgttctccacgctgccgttcccggtgtacagcaacggcatccacagcacgcagaccgct
ctggagaggaaggaggattaa
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