Austrofundulus limnaeus (annual killifish): 106533605
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Entry
106533605 CDS
T06063
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106533605 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106533605 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106533605 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
alim03029
]
106533605 (rb1cc1)
Protein phosphatases and associated proteins [BR:
alim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106533605 (rb1cc1)
Membrane trafficking [BR:
alim04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106533605 (rb1cc1)
Mitochondrial biogenesis [BR:
alim03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106533605 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
106533605
NCBI-ProteinID:
XP_013885425
UniProt:
A0A2I4CZL6
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQLKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFNTAYTNYQQ
DLEEIKVKLSKLGTSVSVMARIPLLECLTRHSYRESIVKSSSTPDKDSDETEEEKSTDSV
LCATQTQRPSKSSASLSASGTATCEAEGDQGTNEMTDSGGLRAALLDEDTADLAGQSIFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRTS
FLRNRLFKGLDSWPPTSFCTQRPRRFDDELPDISLDDLQYLKSCCPAEVQPFLMVPAMCD
FEPLHHHVESLHQLVQAAQSVDEMSQTITDLLSEQRTSCIHRSTAWTPQSESKSGTTASI
SSKTPPSLSLQGPSCQPLHVPIPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDL
DSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQDTT
TLARENSRVAELQKAVEKYKYAAEKSHSNLRSVKDDLYYLRGLVVKEQQDFGLALLSMSS
EVRTTVDDICQTHETELKALHQCELLSVRQELEKQVLALTEENQVNQNIVRDVQRAMLEL
EGLMERKEKELTQLENEKERWAEKESDLAGRIKNLDQIISDQTEEAKVLSASKDSLTSQL
ENLHFEIERSQQKIRQELEVVAQGHLKELEDKMNQEHKIELDSLNRNNQVALESLAVENN
TKLTEATDQYATAIKEKDVQIKDLEARFTELAELRCKLEVELALKDAETEEVKILFEEAK
SQHAEALNTQIEAETKVLRAELADLKRQLQAKNEEYELDLAELRTLMRIEKDHCISELVD
RHEEEAALLHTKVSTLQQQALDAERISAEQQQNLKEEFHQQVAALGEEKEKQSRRFQDLE
QELRTVISDLRAENDLLSKKLEQDKPAGQKDEDKEAASDAVAQEAFKELEQQKEEKEKEL
LGRIKQLEKELQETQSLKSDGGLSLSADGHADAGAPLSLDSALQERLQQERASLLTQLDL
LEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIIKELTEKFQDVTQQQEKDKALI
ETLSEDRASLMQEKKHLEEELNRLRSTALVSSTFFPSNPSVPDASEAGAAARALPVAEAC
FSEGLSETDRLASVAAIRDDDHVDSAVEASMVAVHDNMMSEEKQRIILLERTLHMKEEEN
KRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSE
SLTALDLKPASGSSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNRKV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgacctt
gctgtccagactgtactggagcttaaacatgccatccaagccaaatacaagatcgcagtt
cagcatcaagtcctggtggtcaatggaggggaatgtatggctgcagacagacgagtctgc
agctacagtgcaggcactgaaaccaaccccatattcctgtttaacaaagagatgatcttg
tctgaccgggatccaacaatccctaaaaccaccttctcgattgaaagcgagattcagttg
aaggtggaggagtcactattgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctctttttgtgagcgtttggtt
cacgatgaacatctccaacatcaaggctgggcagccatcatggccaatctggacgactgc
accctgtcttatcagaagttgctcatgaaattcaacacagcatacactaattatcagcag
gaccttgaggaaattaaagtcaagctttccaagttagggacttcagtttctgtcatggct
aggatacctctgctggaatgtttgacgagacacagttacagagaaagcatagtgaagtcc
agttcaaccccagacaaggattcagatgagacggaagaagaaaagtccactgactctgtg
ctctgcgctactcaaacacagaggccctccaagtcatcggcctctttgtctgcttcgggc
acggccacatgcgaggcagaaggagatcaggggacaaatgaaatgactgacagtggtggg
ttaagggctgcacttttagatgaagacactgcagaccttgccggccagtccattttcaac
gttacactgttggactggataaatgttcaagacagacctaatgacgtggaatctgttgtg
aggaaatgttttgactccatcaacaggctcgacccaaggatcattcaacctttcctgaca
gagtgtcgggacacaattgcaaagctggataatcagaacatgaaatccatcaaaggcctt
gaagacaggttatatgctcttgaccaaatgattgcaagctgtaagaagttggtaaacgag
cagaaagaactcgctcaggggtttttggccaaccagaagagagctgaaaacctgaaggat
acgtctgttttgcctgacctgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgttagatattaaaaagaagtgcaccactgccaaacaagaattagca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgcttcacgcagatcaggac
ggagagaagcttcaggctctcctcagacttcttacagagctaatggaaagagtgcgggtg
gtcgaggccctcagtactgtgccccagatgtactgcctggcagttgtagaagttgtgagg
agaaaaatgttcatgcgccactatcgagagtgggcaaacgctcttgtgaaggatgggaaa
cgactatacgaggcagagaagtttaaaagagaatcttttgggaaactctttaggacatct
ttcctccggaatcgattgtttaaagggcttgattcatggcctccaacttcattttgtaca
caaaggcccagaaggttcgatgatgaacttccagatatctcacttgatgacctgcagtac
ttgaaatcatgttgtcctgcagaggtgcagccttttctaatggttcctgctatgtgtgat
ttcgagcctttacatcaccatgtcgagtcccttcatcaactggtccaagctgcacagagc
gtggatgaaatgtctcaaactattactgacttactaagtgaacaaaggacatcctgtatt
catagatcaacagcatggactccacagtctgaaagcaagtctgggaccacggcatcaatt
tcctctaaaacacctccctcgcttagtcttcagggacccagctgccagcccctacatgta
cccatcccagctcctttagaggatttatctccagacagcattgatgcacagacttttgac
tttgaaaccataggccatccaaacatggatcctgtcctgcagcagggatcccttgacttg
gactctcttgccgaaagccccgaatctgacttcatgtctgccgtcaacgagttcgtgatt
gaagagaacttgacctcgcccaatcccattagtgaccccaccagccccgagatgatggtt
gagtcgctgtactcctcagtcattaatgcaattgacaacaagcgaatgcaagacaccaca
acactagcgagagagaactcaagagttgctgagctccaaaaagctgttgaaaaatacaaa
tatgctgcagaaaagtcccactctaacttaagaagtgtaaaggatgacctatactactta
agaggcctagtagtgaaggaacaacaggactttgggctagccctgcttagcatgagctca
gaagtacgcactactgtggatgacatctgccaaactcatgaaactgagctgaaagcgctg
catcagtgtgagcttcttagtgttcggcaggagctcgagaaacaagttcttgcgctgacg
gaggaaaaccaagtcaaccaaaacattgtgcgggacgtgcagcgcgctatgctggagctc
gaggggctcatggagcgcaaagagaaggagcttactcagctcgagaacgagaaagagcgg
tgggcggaaaaagagagcgatctcgctggtcggatcaaaaacctcgaccagattatcagc
gatcaaacggaggaggccaaggtgctttcagcttcgaaagactctctgaccagccagctt
gaaaacctgcactttgagattgaacgcagtcagcagaagattcgacaggagcttgaagtg
gttgctcagggccatttaaaggagttggaggacaaaatgaaccaggagcacaagattgaa
ctggacagcttaaataggaataaccaggtggctctggaaagcctcgctgttgaaaataat
acaaagttaactgaggcaaccgatcaatatgccacagccattaaagagaaggacgttcaa
atcaaggacttggaagctcgatttactgagcttgcagagctccgctgcaaactagaggta
gagttagccctcaaagatgcagaaacggaagaggttaaaattttgtttgaggaggccaag
agtcaacatgcagaggctctaaacacccaaatcgaggctgagaccaaagtacttcgagct
gagctggcagatctgaaaagacagcttcaagcaaaaaacgaggagtatgaattggacctg
gcagagctgagaactctcatgaggatcgaaaaagaccactgcatctcggagctggtggac
cgacatgaagaggaggctgccctgttgcacaccaaggtctccaccctgcagcagcaagcc
ctggacgccgaaaggatctctgcggagcagcagcaaaacctcaaagaggaattccatcag
caggtggctgcgctcggcgaagaaaaagagaagcagtcgaggaggtttcaagacctggag
caggagttgaggactgttatcagcgatttgcgggcagagaatgacctgctctcgaaaaaa
ctggagcaggacaaacctgcaggtcagaaagatgaggacaaagaggcagcctctgatgct
gtagcacaagaagcctttaaagagttggagcagcagaaggaggagaaagagaaggaactt
ttaggcagaatcaaacaacttgagaaagagcttcaagagacgcaatctttaaaaagtgat
ggagggttgtcgctgtctgctgatggccatgcagatgctggagcacctctgtctctggac
tcagcattgcaagagcgcctgcagcaagagagggcctccctgctaactcagttagatctt
ctcgaaaagaagaagaacgaagagatgcaaaaccttaagacatcgctaatcgctgagcag
cagactaatttcaacacagttctaacccgagaaaagctgaagaaggagcagattatcaaa
gagctcacagagaagttccaggatgttactcagcaacaggaaaaggacaaagctctaata
gagactttgtccgaggaccgggcaagtttgatgcaggaaaagaagcacttggaagaagag
ctgaaycggctgcgcagcactgctttggtgtcctccaccttcttcccctccaacccttca
gttccggatgcttcagaagctggagcagcagctcgagctctgcccgttgctgaggcttgt
ttttcagagggcctgtctgagactgacagactggcctctgtggcagccattcgagatgac
gaccacgtcgattctgcagtggaagccagcatggtggctgtccatgacaatatgatgtca
gaggagaaacaacgaataatcttacttgagaggactttgcacatgaaggaagaagaaaac
aagcgcctaagtcaaagactgatgtctcagagcatgtcgtcggtgtcatcacggcattca
gacaaaatcgccatcagagatttccaggttggcgatttggttctaatcatcctggatgaa
aggcatgacaactacgtgctgttcaccgttggtcccaccctctactttctccactcagag
tctctcactgcactggaccttaaaccagcatcagggagctcaagacgaccgtgggtcctt
ggaaaggtgatggagaaggaatattgccaggcaaaaaaggcccagaacaggttcaaagtt
cctttaggaaccaagttctacagagttaaagctgtttcctggaacagaaaagtataa
DBGET
integrated database retrieval system
