KEGG   Austrofundulus limnaeus (annual killifish): 106533633
Entry
106533633         CDS       T06063                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106533633 (atxn2)
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106533633 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 106533633
NCBI-ProteinID: XP_013885472
UniProt: A0A2I4CZQ0
LinkDB
Position
Unknown
AA seq 1152 aa
MSMKAGGNRSKPGGGNTTGAAASGAGGSGGGRQNLGRGRHSGKGSTAVIFSGVYANMRMV
HVLTSVVGTKCELKVKNGAIYEGVFKTYGPECDLVLDAAHRKSSELSIGPRKEDIAESII
FKASDVVLVTFKDVDLNFARKVSSDSDNFTDAAVSGRINGEHKEKDLEPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKFNEEKYGVLSTYDSSLSTYTVPLERDDSEEFLKREARAAQL
AEEIEASATYKARVALENDDRSEEEKYTAVVRGERETHTLSRENKYIPPGQRNREVMSWG
PGRQNSPRLGQSSGGPSSSRPGPHDYSPSSGTDQRVVNGGSSHWPSPCPSPSSRPPSRYQ
SGPSSLPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRMS
SEGSHTGGADLGKGPPRMSPKSQRTPRSHRVPPSRIGGGHPGVDLISHSSAGDSPTAPPT
RNSSSGGTWSSVVSGAHRPRSPRQNSMGGASPGSSSLSSPQTGPAPVETVTTRTSAASPT
AASPXPNMVASPPGDHGKECRVQEARQSSPSTNSEVIKPLDSSPSVTRGVCKGPPMAPDH
RKQIDNLKKFSEDFRLQPSSNADAAFEQMMTKPPRDPADKPKDLXLDKASAVGRDSAESC
VVLPAGTSAVPPAPSSTSTNTSKPGSPAALSPSPSAPDQKRSGLDVTSQGVQTTTMSRFS
GAKHEEKEEKKEAVQDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQ
QPQAVYGQTVCFPQMYPLTPVSPGVQKSIIWKSPAVYQVQMPHMTVSQSKPYRPGKGFDF
DSRRISLVPNMPQQRSDQHHPPGTPTMMHPATAAGPPIVAPNPAYSAQYFTCSPQQFTSQ
PLVQQMPHYQSQAQHVFSPVMQGSARMMAPPAHGQPSLVSSSTTQYPEQTHTMYVSPGPM
PQQYPHPSATLHPHPQHPQPSATPTGQGQQGGPPQHGGPQSHPAASPVQHPQHPQAAAAA
LHLAGQPPQQQMYSALAPTPPSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNPNHMA
HVQQAHMQSGIVPSHHPAPTHAPMMLMATQGPPGGPQPPMPQTALNPIPVSSTTHFSYLA
HPQVQPHHQQQL
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggaggaaatcgaagcaagcccggcggtggcaacacgactggtgcg
gccgcctctggagccggaggaagcggtgggggaagacagaatctgggcaggggaagacac
agtggtaaaggatctacagcagtaattttcagtggtgtatatgcaaatatgaggatggtc
catgttttaacatcagtggtggggaccaagtgtgagctgaaagtgaaaaatggagcaata
tatgaaggagtatttaagacatatggcccagagtgtgacctggtgttggatgcagctcac
agaaagagctccgagctgagtataggccccaggaaagaagatattgcagagagcatcatc
tttaaagcctctgatgtcgtattggtgaccttcaaagatgtggacctgaattttgctaga
aaagtctcctctgactcagacaacttcactgacgcagcggtgagcggcaggattaacggt
gaacataaagagaaggacctcgagccctgggacggaggagaaacccacaactctgacagc
ctcgagtctctggatacagatgtgtcgaatgggtgggatcccaacgacatgttcaagttc
aacgaggagaaatacggagttttgtcgacttatgacagcagcytgtccacgtatacggtc
cccttggagcgtgacgactccgaggagtttctgaagagagaagctcgcgctgcccagctg
gcagaggagatcgaggccagcgccacgtacaaggcccgcgtggccctggagaacgacgat
cgctccgaggaggagaagtacacggctgtggtgcgaggggagagggagactcacacgctc
agcagagagaacaagtacattcctccaggccagaggaacagggaagtgatgtcatgggga
ccaggacgccagaactctcctcgtttgggtcagagctcaggtggaccctcatcttctcga
ccaggacctcacgactacagtcccagctccgggactgaccagagggtggttaatggaggt
tcatcccactggccctcaccctgtccgtctccttcttctcgtcccccctctcgttaccag
tctggcccctcctccctgcctcctcgggcgaccacgcccacccggccaccctccagaccc
ccctcccgaccttccaggcctccctctcattcatcccacccctcctatccctcctcttca
tcttccttttctcaccacgggcccacgtcgccagcctccactctgcccaaacgcatgtcg
tcagaaggtagccacacgggtggagccgacctgggcaaaggtcctcccaggatgtctccc
aagtcccagcggacacctcgttctcacagagtgcccccatcgcggatcggcggcggccac
cctggcgtggatttgatctctcacagttcagccggggacagtccaacagctccaccgacc
aggaacagctcctctggtgggacttggtcttcagtggtcagtggagctcacagacctcgc
tccccgcgacagaacagcatgggcggagcttcccctgggtcttcctccctctcttcaccc
caaacaggaccagctcctgtggaaactgttacaacacggacatcagctgcttctcctact
gctgctagccccrcccccaacatggtcgcctctccaccaggagatcatggaaaagaatgt
cgtgtccaagaggcaagacagtcctccccatcaacaaacagtgaggtcatcaagcctttg
gacagctcacctagtgttacaagaggagtgtgtaaaggacctcctatggcaccagaccac
agaaaacaaatagataatttgaagaagtttagtgaagattttagattgcagcccagttca
aaygcagacgctgccttcgagcagatgatgaccaagcctcccagagaccctgcagacaaa
ccaaaagatcttcycctggacaaagcctccgcagtgggacgggacagtgcagaaagttgt
gtagttcttcctgctggcacgtccgccgttcctcctgctccttccagtacatccacaaac
accagtaagcctggcagccctgctgctctgtctccatctccctcagctccggaccagaag
aggtccgggctggacgtgacctcacaaggagttcagacaacaaccatgtcgaggttcagc
ggagccaagcacgaagaaaaggaggagaaaaaggaagcagtacaagatcaagtaagaaaa
tccaccctgaacccaaatgctaatgagttcaaacccaggtttaatacacagcctaaacca
gccaacaccccgacgcctcctcggcctcagggccagcccagcccctccatcgtggttcag
cagcctcaggctgtgtacggccaaacagtctgcttccctcagatgtacccgctgaccccg
gtcagccccggagtgcagaaaagcataatatggaagtctccagctgtgtaccaggtccag
atgcctcacatgacggtcagccagtcgaaaccctacagaccaggtaaaggttttgatttt
gattcccgacgtatatctttagtacccaacatgccccagcagaggtccgaccagcaccac
ccgcccggaacgcccaccatgatgcacccggcgacggccgcgggtccgcccatcgtagct
ccgaacccggcctactctgcgcagtacttcacctgcagcccgcagcagttcaccagtcag
ccgctcgttcagcagatgccgcactaccagtcgcaggcgcagcacgtgttcagtccggtg
atgcagggcagtgccaggatgatggccccccctgctcacggccaacccagtctggtctcc
tcctccaccacacagtacccggagcagacacacaccatgtatgtgtctccagggcccatg
cctcagcagtacccccaccccagtgccaccttgcacccccacccccaacacccccagcct
tctgccactcccacaggccaaggccagcagggtggtcctccgcaacacggaggtccccaa
agccaccctgctgccagcccggtccagcacccrcagcacccgcaggcggcggcagcagcc
ctgcacctcgccggacagcccccgcagcagcagatgtactcggctctggccccgacgccc
ccctccatgacgccgggacctaacccccagtctccccaggcatcgttcccttccgcccag
cagaccgtgtacatccaccctcagcaggtgcagcacggctacaaccccaaccacatggca
cacgtgcagcaggctcacatgcagtccggtatagtgccgtctcaccacccggcccccacc
cacgccccgatgatgctgatggccactcagggtccccccgggggtccgcagccacctatg
ccccaaaccgccctcaaccccatccctgtttcctccaccacacatttctcctacctggca
catccacaagtgcagcctcaccaccagcagcagctgtag

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