Austrofundulus limnaeus (annual killifish): 106533822
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Entry
106533822 CDS
T06063
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106533822 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106533822 (exosc4)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106533822 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106533822 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106533822
NCBI-ProteinID:
XP_013885719
UniProt:
A0A2I4D0F7
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLESLIEAAMTACKGVSKVLDEVVRQHLQEAS
VLTRE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttggagttgctgtctgatcagggataccgtctggatggaagaaaagccacc
gagctgcggaaggttcaggcccgcatgggtgtgttcgcccaggctgacggttctgcgtat
ttagagcagggaaacacgaaggctctggctgtggtttacggtccacatgagatgcgtggt
tcgagaagtcggaccctccacgatcgagcggttatcaactgccagtacagcatggccacg
ttcagcacggcggagaggaaaaggagaccacacggagaccgcaaatccaccgagatgagc
ctccacctgaagcagacgtttgaagctgctgtgatgacccagctcttcccgcgctcccaa
attgatatttatgtcaagattctgcagtcagatggaggaaactacagtgtttgtgtgaat
gctgccaccctggctgtgattgatgctggcatccccatgcgagactacgtgtgcgcctgc
accgtgggcttcgtagacgagaccccccttgctgacctttgctacgcagaggagagcgga
ggagtgagctctttggcgttagcgctgctgcccagaggaggacaaattgcccttgttcag
atggacgccagactgcatcaggatcacttggaatcacttattgaagctgcaatgactgct
tgtaaaggtgtgagcaaagtgctggacgaggtggtgaggcagcatcttcaggaagcctcg
gtgctcaccagagagtga
DBGET
integrated database retrieval system
