Austrofundulus limnaeus (annual killifish): 106533994
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Entry
106533994 CDS
T06063
Name
(RefSeq) helicase ARIP4-like
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106533994
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106533994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106533994
NCBI-ProteinID:
XP_013885943
UniProt:
A0A2I4D143
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MSEEAISESDLEASPESEVEFMENEEEEDNEENEDMDVDEDENDGDDEDDDQPASAQSRT
DGTQDGGDSSSVSSEDPSSRPPSQPASRPSSRTSSRPESGSQAAASPENSSQRKPPSSKT
KKQKSSKLPKSSKSSKGSKPSKPSKPAHMRKNIRKLLKEDQLEAGTKAAQQEEMERRKRL
EQQRKEFPMPASVLPDSQLVETAALLAEVSHLVPAVPSDVICLDSSGEEDEKLESNLPAL
AIRNDVIELSSGDEDALQISSESADEDAEGATGSEESSGAHINDALNLPDAQGQVLVNIN
HPPEEKDIYLAPQLARAVKPHQVGGIRFLYDNLIESLERYKTSSGFGCILAHSMGLGKTL
QVISFIDILLKNTEARTVLAIVPVNTLQNWLSEFNLWLPPQDSLPPDTDPTLVTGRTFKV
HILNDEHKTTVARAKVVEEWSRDGGVLLMGYEMYRLLSMKKSFVMGKKRKTKKPVGPVII
DLDEEDRQQELMKGIEKAIVRPGPDVVICDEGHRIKNYHASTSQALKSIRSRRRVVLTGY
PLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCMDSTPQDVRLMRYRSHVLYS
LLEGFVQRRGHDVLRHHLPSKEEFVILVRLSPVQKALYTEFMKRFREAGNSGWLGLNPLK
AFCVCCKIWNHPDVLYEALQKENQANEQDLDLDDITSASNPRCPAPSTGLKAKVPDPSNS
KVNNSLPLVNISQDRANQVITYEWAKDIMSNYQIGVLENSAKMVLLFHLIDESVKRRDKV
LVFSQSLSTLTVLEDFLSKRPMPGGIATTDGQNPNWVRNLNYYRLDGSTSASERERLINQ
FNDPENTTTWVFLLSTRAGCLGVNLIGASRVIVFDASWNPCHDAQAVCRVYRYGQRKPCY
IYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPVLNFTRKEVESLLHFVEEEPEAEKLL
MESQDLESVIRQACQLYPNLITKPPFHHESLLVDRKESKLTKAEKRAAKKSYEDEKRASV
PYSRPSYVPYYPTSDHTLASIAAFNQRGWRPLTRPDDKPVASVRPIQSTPIPMMPRQVGM
GMSGFSSAGNLPLNFLQKAGVYVQRIVTTTDIVIPGPNGSSEIQAHIPIGESIHIIRGSK
GTYIRTNDGRIFAIRSGKNSRSVIGTSASSRGSQSSSIQRVSNGCSSPVDQQQRSPNSDQ
QPSSPSSSEILRELSNYTSSAGDASSGAGNEPSLPSDVSSVPAGDEGSSQTSDLRREVSD
ELLSSALEVRGKKRKHNDNQGSNAQTGGKHTSAAAHFPSLPLGSSGLSFPPVSLNSSSLL
GNLSHMSQPLLMAGGGSSFLQPPGQTMADLQSMFPSAGADLLRQPAIGNGHLPTPSSSSA
FSSASTTVPMSSSPSAGTSSSLPSAPLPPYLMNQNMAGLLSPNFSVGYGQPLLSAPRMFP
NTLLPGTGGFSTPNSNSATPGFLSHFNNPTSSLLGAALAQPDRYPSSVNGGDSSDDDVIE
VTGQ
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaggcaatttcagaaagtgacctggaggccagccctgagagtgaagtggag
ttcatggaaaatgaggaagaggaggacaatgaggagaatgaagacatggatgttgatgag
gatgaaaacgatggagatgacgaagacgatgaccaacctgcaagtgcccagagtcgaaca
gacggcactcaggatggcggggactcctcttcagtttcctcggaagacccttcctcaaga
cctccatcccagcctgcatcccgtccgtcctccaggacctcttccagacctgaatctggt
tctcaggctgcagccagccctgagaactccagccagagaaaaccaccttctagtaaaacc
aagaaacaaaaatcctctaaattacccaaatcatcaaagtcttcaaaaggctccaaacct
tccaaaccatcaaagcctgcacacatgaggaaaaacatcagaaagttgctaaaggaggat
cagctggaggctgggactaaagcagctcagcaggaagagatggagaggcggaaacggctg
gagcagcagaggaaagaattccctatgcctgcctcagttctcccagattctcaactagtg
gaaactgcagctttattagcagaagtgtctcatttagttcccgcagtcccgtcagatgtg
atctgtctggacagcagcggggaggaagatgaaaaattagagtcgaatttgccggcgctt
gccattagaaatgatgtaatagagctcagctcgggggatgaagacgccctacagataagc
agcgagtcggccgacgaggatgccgagggtgccactggttcagaggagagcagcggtgcg
cacatcaacgatgcgctgaatctgccggacgcccagggtcaagtgctggtgaacatcaac
catcctccggaggagaaagacatttatctcgccccacagctggccagagctgtcaaacct
catcaagtggggggaatccgctttctttatgataacctcattgagtctctggagcggtac
aagaccagcagtggctttggctgcatcctcgcccacagcatgggcttgggcaaaacgcta
caagtcatttcttttatcgacatccttcttaagaatacggaggcccgcactgtgctggct
attgtccctgtgaacacgcttcagaactggttatcagaatttaacctctggttgccgcct
caggattccctgcctcctgacaccgacccgacgcttgtcactggtcgcacattcaaagtt
catattctcaacgatgagcacaaaacaacggtggctagggccaaggttgtggaggagtgg
tccagagatggcggtgtgctgttgatgggttatgagatgtaccgcctgctgtccatgaag
aagagctttgtgatggggaagaagaggaaaacaaagaagcctgtcggaccggtcatcatt
gacctggatgaagaggatcgacagcaagaactcatgaaaggcattgaaaaggccatcgta
cggccggggcccgacgtggtgatttgtgatgagggccatcgcatcaagaactaccatgcc
agtacatcrcaggccttaaagagcattcgttcccggcgccgggtggttctcacaggttac
ccgcttcaaaacaacctcatcgaatactggtgcatggtggactttgtccgaccggacttt
ttaggcacgcggcaggagttcagcaacatgttcgagcgtcccatcctgaacggccagtgt
atggacagcacgcctcaagatgtccgcctgatgcgctaccgcagccacgtgctgtacagc
ctgttggagggttttgttcagagacgaggtcacgacgtgctcaggcaccatcttccaagt
aaggaggagtttgtgatcttggtacgcctctcgcccgtccagaaggcactgtataccgag
ttcatgaagcgctttcgagaggcgggaaacagtggttggctcggtctcaacccactcaaa
gccttctgtgtttgctgcaaaatctggaatcacccggacgtcctttatgaagcactgcaa
aaggaaaaccaggccaatgaacaggacctggacttggatgacatcacctcagccagtaac
cctcgctgccctgctcccagcactggtctgaaggccaaagtaccggacccaagcaacagc
aaagtcaacaacagcctgccgctagtcaacatatctcaagaccgagccaatcaggtcatc
acatatgaatgggcgaaggacataatgtcaaactaccaaattggagttctggagaactct
gcaaaaatggttctgctctttcacttgattgatgaaagtgtcaagagaagagacaaggtt
ttggtcttcagtcaaagtctgtccaccctgacggtacttgaggacttcttatcaaagaga
cccatgcctggaggcatcgcaaccactgatggccagaatccaaactgggttcgcaacctc
aattactacagactggacgggagtacatctgcctcagagcgagaacgacttattaaccag
tttaatgatccggagaacacaacaacatgggttttcttactttctaccagagcgggctgt
ttgggggtaaatttgatcggggccagtcgggtcattgtgtttgatgcatcgtggaacccc
tgtcatgacgcccaggcagtatgtcgtgtgtaccgttacggtcagaggaaaccctgctac
atttaccgcctcgtctgcgacttcacactggagaagaagatctacgatagacaggtgtcc
aaacagggcatgtctgatcgtgtcgttgacgacttgaacccagtgctgaacttcacccgt
aaggaagtggagtcactgctgcattttgtagaagaggagcctgaagctgaaaaacttttg
atggaatctcaggacttagaatcagtgattcgtcaagcttgtcagctttacccaaacctc
atcacaaagccacctttccaccacgagtcactgctggtggatcgcaaggagtcgaaactg
accaaagcagagaagagagctgcaaagaaaagctatgaggatgagaaacgagcctctgtc
ccctactctcgcccgtcgtatgtcccctattacccaacaagtgatcatacgcttgcgagc
atagcagcctttaatcaacgtggctggcgtcccctgacacgaccagatgacaaaccagta
gcaagtgtcaggcccatccagtcgacaccaatcccaatgatgcctcgccaagtgggcatg
ggcatgtcgggcttcagctctgcaggcaacctccctctcaacttcctgcagaaagctgga
gtttatgtgcaaaggattgtcaccactactgacattgtaatccctggacccaacggttca
tcagaaattcaagctcacattcctataggagagagcatccacattatcagaggatctaaa
ggtacttacatcaggacgaacgatggaaggatttttgctattcgatctggaaagaatagc
agatctgtgattgggacgtctgcttcttctagaggctcacagagctcctcaatccagcga
gtcagtaatggttgttcatcgcctgtagatcagcagcagcgctctcctaacagtgaccag
cagccttcttctccttccagctctgagattctcagagagctcagcaactacacttcatcc
gcaggcgatgcctcttccggtgcagggaacgaaccatcattaccgtccgacgtgtcgtct
gtgcctgcgggagacgaaggcagttcacagaccagtgatctccggagggaagtcagtgat
gagctcctgagttcagcgttagaggtgcgaggcaagaaacgcaagcacaacgacaaccag
ggcagcaacgcgcagacaggaggcaaacacacttcagccgcagctcattttccaagtctg
cctttgggttcgagtgggctcagtttcccgcctgtgagtctgaactcttcgtccctgctg
gggaatctcagccacatgagtcaacctcttctaatggctggtggtggatcatcgttcctt
cagcctcctggacaaaccatggctgacctacagtccatgttcccctcagccggtgcagac
ttactgagacaacctgctatagggaacgggcaccttcctaccccgtcctcatcctctgct
ttctcctctgcatccaccactgttcctatgtcgtcttcaccctcagcaggaacctcttcc
tccctcccctctgcccctttgcctccgtacttaatgaaccaaaacatggcaggtcttctc
tctccaaatttctctgtcggctacggtcagccgctgctttccgcaccaagaatgttcccc
aacactctgctcccggggacgggggggttctcaacgcccaactccaactctgccacacct
ggctttctctcccatttcaacaaccccacttccagcctgctgggggccgctttggcccaa
ccagacagatatccgagttctgtaaacggaggggacagttctgatgacgatgttattgag
gtgacaggacagtaa
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integrated database retrieval system
