Austrofundulus limnaeus (annual killifish): 106534156
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Entry
106534156 CDS
T06063
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106534156
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106534156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106534156
NCBI-ProteinID:
XP_013886145
UniProt:
A0A2I4D1L9
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSSCSTDIKENRDLDNPCSKGRVEAKAVQLPNRSAGCGRKRPLEEGKGHTHSRYRPKKRK
KVPGPILPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFEMTVEVNGQLFNGSGPTKKKAK
LNAAEKALXSFVQFPNASEAHMAMGRTLSVHTDFTSDHADFXDVLFNAFEGSVPLNDPFF
LASNSKRSFASMAISYPLLPSPIPNLIKSPLTPAPSSSTSPTISRNPVMILNEMRPGLKY
TFVSESGESHAKNFVMSVTVDAQVFQGSGRNKRLAKARAAQAALSALFNLQLDQAPSQQP
IPREGLQLHLPQVLADAVSHLVIDKFSQLTDKFTSPHARRKVLAGVVMTTGSDVKEAQVI
CVSTGTKCINGEYISDHGLALNDCHAEIVARRSLVRFLYSQLECFLSNNEEEXQRSIFTK
RNDKNGYTLKENVQFHLYISTSPCGDARIFSPHEAGTEDQGDKHPNRKARGQLRTKIESG
EGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGFQGSLLSYFSEPIYFSSIIL
GSLYHADHLSRAMYQRITEIEALPQSFSLNRPLLSGISNTEARQPGKAPNFSVNWTVGDV
GLEVINATTGKDDLGRPSRLCKRMLYSHWTHLYHKLSSSLRIQSVQPSSYHEAKQAAVEY
HSAKQTLFKAFHKAGLGAWVKKPIEQDQFSLNT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgcagcacagatattaaggaaaatcgagacctggacaacccctgctccaaa
gggagagttgaagctaaagctgtacaactccccaacaggagtgccgggtgtggaaggaaa
cgtcccctagaagagggcaarggccacacacattccaggtacaggcctaagaaacgcaag
aaagtccctggacccattctgcccaagaatgcactcatgcagctgaatgagatcaaacca
gggctgcagtacaaactactctcccagaccggaccggtccatgcaccrgtttttgagatg
actgtggaagtcaacgggcagctcttcaacggctcgggtcctaccaagaagaaggctaag
ctgaacgcagcagagaaggctctgrgttcctttgttcagttccccaatgcctctgaagcc
cacatggccatgggtcgcactctgtctgttcacacggacttcacttcagaccacgcagac
tttscggacgtcctctttaatgcctttgagggatctgtgcctttaaatgacccatttttc
ctggcctccaacagtaagaggtcctttgcatcaatggcaataagttatccattgctaccc
tcccctatccccaacctgatcaagtctcccctgaccccggcaccatctagttccacctcc
ccaacaatcagcagaaaccctgtgatgatcctcaatgagatgcgaccaggcctcaaatat
acgtttgtgtcagagagcggggagagccatgccaaaaactttgtcatgtcagtgacggtg
gatgcccaggtcttccagggttccggtcggaacaagagacttgccaaggctcgggcggcc
caggctgctctgtctgctctctttaacctgcagcttgaccaggcaccatctcaacagccc
attcccagagaaggactgcagcttcacctgccacaggtcttggcagacgctgtttctcat
ttggtgattgataagttcagccaactgacggataaattcacatccccacacgctcggagg
aaagtcttggcaggagttgtcatgacaacaggttctgatgtgaaggaggctcaggtcatc
tgtgtgtccacagggacaaagtgcatcaacggtgaatacatcagcgatcacggtttggct
ctcaacgactgccacgctgagatcgtagctcggcgctctctggtcaggtttctgtactcg
cagctcgagtgtttcctcagcaacaacgaagaagagcytcagagatccatcttcaccaag
cgcaacgacaaaaatggctacacactgaaggaaaatgtccagttccacctttacatcagc
acctccccctgcggagacgcccgcattttctcccctcatgaagcgggaacagaagatcaa
ggagacaaacacccgaacagaaaggcccgaggacagctgcgtactaaaatcgagtcgggg
gaagggaccataccagtgcgctccagtaacaccattcagacgtgggatggggtccttcag
ggtgagaggctgcttaccatgtcgtgtagcgacaaaattgccaggtggaatgtggttgga
ttccaaggatctttgctgagctacttctccgagcccatttacttctccagcatcatcctg
ggcagcctgtaccacgcagaccacctmtccagagccatgtaccagaggatcacagagatc
gaggctctacctcagtcctttagtctgaacagaccactgctcagtgggataagtaacaca
gaggctcgtcagccaggaaaagctcccaacttcagtgtgaactggacggtcggagacgtc
ggtttggaggtgattaacgccaccacggggaaagacgatctcggtcgaccctctagactc
tgcaagcggatgctttacagccactggacacacctttaccacaagctgtcctccagcttg
cggatccagtcggtgcagcccagcagctaccacgaggccaagcaggcagcagtggagtac
cattctgccaagcagaccctcttcaaagccttccacaaggcgggactcggtgcctgggtg
aagaagcctatagagcaggaccagttttcactcaacacctga
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