Austrofundulus limnaeus (annual killifish): 106534172
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Entry
106534172 CDS
T06063
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106534172
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106534172
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106534172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
106534172
NCBI-ProteinID:
XP_013886180
UniProt:
A0A2I4D1Q5
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MPIAAAGQPTTQEPRVCPRLPSTPDPVPKGADLFDEAGAEAGATVRSEYGGAEGGRGLGG
YSFSQSGVRSFAEPLRSTNGSPPQSPAATSSFFLHLPHQMTMEPPRTRSRSRSGYYQQYG
VGNNSGVSNHLQQQQQLHPQQQQQHGAGCAPLAAHSNHSENQQRPPGSTVPPSIQRFPSV
PGVHHIPVAGASGGAYHCHPDHAYGEESDKSEESPSPKRQRLSSQPVLEQLTSSAPPPST
PSPPIRPWESGPPSRRQPHPHPLYHQERCLTPARLRRSPPARRQRGRLSRPLRHLPPHHH
ASAQGPTARLSPSELQDENYHHSSHPSTQQTYTSHAPSNYAQPPAVGGGGSDEPRAFHPP
TLSPQVLHPAAHHHPHHHHHHHSHQQQHHATQQQGAMVMDLHERLQQSSVPVSYTVTPVP
PHGLAAPLCGGQHLPPSCSSQPQVPACSVVFSTGQHYHPMLQACSMHHLPVPYTFPSLLS
SDPQFLITPSPHLSHHPPHLPTHAQFLPFQTQPARSPLQRIENEVDIVGEQLPVAGSFSY
AHHHHHHHHQPPTTLPPSTPLQFLSHHDPLSQELFTVPYPHFMPRRFTSRRYRSQQAVPP
SPYHPSFLPYFLSMLPVPPNVAPAISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKA
DIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCP
ICRADASEVQRDSE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacaaccaacgacccaggagcccagagtttgcccccggctg
ccctccaccccggatcctgtccctaaaggggctgatttattcgacgaggcaggggcggag
gcaggggcgacggtgcgttcagagtacggaggcgcagaggggggcagaggactggggggc
tacagtttcagccaaagcggggtgaggagctttgcagaaccgctaaggtcgaccaacggc
tctccgccacagtccccggccgcaacctcttcatttttcctccatctcccccaccaaatg
accatggagccccctaggactcgatcgcgctctcgctccggatactaccagcagtatggt
gttgggaataacagcggagtgtcaaatcacctccagcagcagcagcagctccatccccag
cagcagcagcagcacggtgccgggtgcgcaccactcgcagctcacagcaatcactccgag
aaccagcagcgaccaccaggaagcaccgtcccccccagcattcagaggttcccctctgtt
cctggagtgcatcacatcccagtggcaggggcctctggtggagcatatcactgccatcct
gaccatgcatatggagaggagagtgataagagcgaggaaagccccagtccaaagcgccag
aggctgtccagtcagcccgtcttagaacagttgacctcatctgcacccccaccatccacc
ccgtctccccccatccggccttgggagtcggggcccccgagtcgccgacagcctcaccct
cacccgctgtatcaccaggagaggtgcctgactcctgcacggctcagacgaagcccgcca
gcgaggcgtcagcgtggccgtctctccagacctctccgtcacctgcctccacatcaccac
gcttctgctcaaggccctacagctcgcctgtcaccatccgagcttcaggatgaaaactac
caccacagctctcacccctccacacaacagacgtacacgtcgcacgctccgagcaactat
gctcagccccctgcggtcggtggtgggggttcggacgagccccgagcctttcaccccccg
actttgtcgcctcaagtactgcacccggctgctcaccaccacccacatcatcatcatcat
catcactcccaccagcagcagcaccatgcaacgcaacagcaaggggcgatggtgatggac
cttcacgagcggctgcagcagagcagtgttccagtctcctacacggtgaccccagtccct
ccacacggcctcgcagcgcctttgtgtggcggtcagcatcttcccccttcctgctcctca
cagccacaagtccccgcctgcagcgtggtcttcagcactggacaacactaccatccgatg
ttgcaggcgtgttccatgcatcatttgccggttccctacacctttccatctctactgtct
agtgaccctcagttcctgataactccttcacctcatctgtctcaccacccgccccacctc
ccaacacacgcacagttcctgcctttccagacgcaaccggcacgatcgcccttacaaagg
attgaaaatgaggttgatattgtgggggagcagcttcctgttgctggaagcttcagctac
gcccatcatcaccatcaccaccatcaccagcctcccaccacgctgccgccctctactccg
ctccagttcctgtcacaccatgaccccctgtcacaagagctctttacagtgccatatccc
cacttcatgcctcgtcgcttcacgagccgacgttaccgctcccaacaggctgtgcccccc
tctccctatcaccccagcttcctgccttacttcttgtctatgcttcctgtgcccccaaat
gtggctcctgctatcagtctggaactggatgtggatgatggcgaggtagagaactacgag
gccctgttgaacctcgctgagcgtttgggagaggccaagccccgcggtctcaccaaggcc
gatatcgaacagcttccgtcgtacaggttcaaccccaacaaccatcagtcagagcaaaca
ctgtgtgtggtgtgtatgtgcgactttgagtctcgccagcttcttcgggtgttgccctgt
aatcacgagttccatgctaaatgtgtagacaagtggctgaaggctaaccggacctgccct
atctgtcgagccgatgcctctgaggtccagcgggactctgagtga
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